Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 Y_RNA.259-201ENST00000364619 101 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 SNORA71.2-201ENST00000364941 134 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
E4F1Q66K89 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
E4F1Q66K89 RNU6-754P-201ENST00000391166 107 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 RNA5SP397-201ENST00000391323 118 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 RNA5SP56-201ENST00000410277 118 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 BTF3L4P3-201ENST00000418879 476 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 RPS27AP12-201ENST00000429552 465 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.75□□□□□ -1.65
E4F1Q66K89 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 AC108145.1-201ENST00000503770 153 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC017037.1-201ENST00000508460 471 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC104806.1-201ENST00000508720 308 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 AP001922.4-201ENST00000526967 290 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC109635.4-202ENST00000531666 412 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 AC044860.2-201ENST00000561005 179 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC024619.4-201ENST00000580924 316 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.75□□□□□ -1.65
E4F1Q66K89 RN7SL690P-201ENST00000582087 240 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 MIR4424-201ENST00000585257 86 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 CTHRC1P1-201ENST00000605383 469 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC012443.1-201ENST00000605605 231 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AL022345.1-201ENST00000607292 135 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AC092807.2-201ENST00000609367 243 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 uc_338.15-201ENST00000615470 191 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
E4F1Q66K89 uc_338.11-201ENST00000619132 160 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.75□□□□□ -1.65
E4F1Q66K89 AP001350.1-201ENST00000601906 1524 ntBASIC4.75□□□□□ -1.65
E4F1Q66K89 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
E4F1Q66K89 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.75□□□□□ -1.65
E4F1Q66K89 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.75□□□□□ -1.65
E4F1Q66K89 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
E4F1Q66K89 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 MTND5P3-201ENST00000438536 1800 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.74□□□□□ -1.65
E4F1Q66K89 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
E4F1Q66K89 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 SNORD115-7-201ENST00000365306 82 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 RNU6-61P-201ENST00000365528 109 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 Y_RNA.378-201ENST00000365652 113 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 Y_RNA.530-201ENST00000384587 101 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 Y_RNA.576-201ENST00000384781 102 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
E4F1Q66K89 RNU4-65P-201ENST00000410473 140 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 RPS20P14-201ENST00000412545 360 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 ARL5AP1-201ENST00000418991 388 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 MTCYBP6-201ENST00000441810 138 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 BRK1P2-201ENST00000442875 223 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 TPT1P13-201ENST00000449760 499 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 PPIAP3-201ENST00000450588 505 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 SNORD19B-201ENST00000459623 84 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 RN7SL329P-201ENST00000467740 299 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.74□□□□□ -1.65
E4F1Q66K89 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.74□□□□□ -1.65
E4F1Q66K89 NDUFB5P1-201ENST00000508134 564 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 RN7SKP13-201ENST00000515933 244 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AC103783.1-201ENST00000520506 373 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 AP000763.2-201ENST00000540641 163 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.74□□□□□ -1.65
E4F1Q66K89 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.74□□□□□ -1.65
E4F1Q66K89 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.74□□□□□ -1.65
E4F1Q66K89 AC006254.3-201ENST00000603353 884 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AL008729.2-201ENST00000606393 473 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 AC064801.1-201ENST00000612025 407 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 RMST_9.1-201ENST00000619945 193 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 AL450326.2-201ENST00000421913 1962 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 API5P2-201ENST00000397055 1498 ntBASIC4.74□□□□□ -1.65
E4F1Q66K89 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
E4F1Q66K89 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
E4F1Q66K89 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
E4F1Q66K89 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
E4F1Q66K89 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
E4F1Q66K89 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
E4F1Q66K89 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
E4F1Q66K89 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.73□□□□□ -1.65
E4F1Q66K89 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
E4F1Q66K89 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
E4F1Q66K89 Y_RNA.132-201ENST00000363421 102 ntBASIC4.73□□□□□ -1.65
E4F1Q66K89 RN7SKP224-201ENST00000364140 325 ntBASIC4.73□□□□□ -1.65
E4F1Q66K89 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms