Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 MFSD8-239ENST00000641590 2479 ntBASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 PANDAR-201ENST00000629595 1506 ntBASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.17□□□□□ -1.58
RNFT1Q5M7Z0 AC007529.1-201ENST00000418574 2178 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL137141.1-201ENST00000624622 4836 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL731532.1-201ENST00000623972 4236 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RNA5SP234-201ENST00000363916 119 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RNU6-151P-201ENST00000364158 107 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 Y_RNA.357-201ENST00000365487 109 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RNA5SP30-201ENST00000365552 115 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 Y_RNA.571-201ENST00000384753 98 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL357139.1-201ENST00000407792 426 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RPL12P17-201ENST00000432393 498 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AC005002.2-201ENST00000438228 269 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL163193.1-201ENST00000444895 788 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL450023.1-201ENST00000450868 751 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RNU1-88P-201ENST00000459274 128 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RNU7-87P-201ENST00000459343 62 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RN7SL515P-201ENST00000463999 297 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL160314.1-201ENST00000490836 438 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 ANXA2P1-201ENST00000505539 926 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 BX510359.5-201ENST00000515651 304 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 snoU109.6-201ENST00000516831 118 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 RNA5SP34-201ENST00000516887 130 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AC114947.2-201ENST00000565748 2125 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 MRPS21P7-201ENST00000566937 238 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 OR1F2P-201ENST00000570470 933 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 FKBP1AP1-201ENST00000594588 318 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 AL591926.4-201ENST00000616895 298 ntBASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNFT1Q5M7Z0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
RNFT1Q5M7Z0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNFT1Q5M7Z0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNFT1Q5M7Z0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNFT1Q5M7Z0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.15□□□□□ -1.58
RNFT1Q5M7Z0 AC020656.2-201ENST00000613291 5309 ntBASIC5.15□□□□□ -1.58
RNFT1Q5M7Z0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 SNORA46.1-201ENST00000391069 153 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 CYCSP33-201ENST00000414485 327 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 CEACAMP1-201ENST00000434624 1035 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AC127537.2-201ENST00000439258 465 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AL360271.2-201ENST00000447710 161 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AC010655.1-201ENST00000449336 292 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 TOMM22P4-201ENST00000511318 336 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.706-201ENST00000516933 99 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AL133393.1-201ENST00000603277 287 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 IMMP1LP3-201ENST00000604197 224 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AP001005.3-201ENST00000622049 129 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 AC005224.3-201ENST00000584683 2140 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 DDX10P1-201ENST00000448545 1933 ntBASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RNFT1Q5M7Z0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AC022164.1-201ENST00000568767 2673 ntBASIC5.14□□□□□ -1.59
RNFT1Q5M7Z0 AL391516.1-201ENST00000554380 2449 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms