Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
PCGF3Q3KNV8 TEX21P-201ENST00000447107 1476 ntBASIC3.4□□□□□ -1.87
PCGF3Q3KNV8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.4□□□□□ -1.87
PCGF3Q3KNV8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCGF3Q3KNV8 MAPK10-362ENST00000641864 4484 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC021755.1-201ENST00000559747 1447 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 HLFP1-201ENST00000402375 499 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 U3.42-201ENST00000408746 214 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 RNU2-62P-201ENST00000410868 191 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 BTF3L4P1-201ENST00000413813 468 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 BX890604.2-201ENST00000427883 474 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AL356867.1-201ENST00000429623 299 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC010153.1-201ENST00000432862 727 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 HMGB1P37-201ENST00000439613 609 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 MTND6P13-201ENST00000443510 523 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 U3.44-201ENST00000458938 192 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC010631.1-201ENST00000474150 156 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 Y_RNA.672-201ENST00000516289 104 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 RN7SKP83-201ENST00000516512 178 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AL163153.1-201ENST00000554223 283 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 MIR3118-1-201ENST00000581787 76 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AP000860.1-201ENST00000605250 559 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC087752.4-201ENST00000605911 462 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 uc_338.12-201ENST00000616344 181 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 AC008568.2-201ENST00000623862 2313 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.39□□□□□ -1.87
PCGF3Q3KNV8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 SDAD1P2-201ENST00000441308 2028 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 RPS3AP36-201ENST00000398190 775 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AC016907.1-201ENST00000419483 435 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AL589872.1-201ENST00000426602 288 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AL590383.1-201ENST00000428602 75 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 SSXP4-201ENST00000451349 245 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AC010587.1-201ENST00000505809 469 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 MIR3611-201ENST00000584484 83 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AP001506.1-201ENST00000615444 211 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 SNHG22-203ENST00000617833 660 ntBASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCGF3Q3KNV8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 AL161912.2-201ENST00000565707 3007 ntBASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 Y_RNA.126-201ENST00000363382 111 ntBASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 RNU2-8P-201ENST00000410727 190 ntBASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.37□□□□□ -1.87
PCGF3Q3KNV8 BX842559.1-201ENST00000419615 532 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms