Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AC011944.2-201ENST00000624440 683 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AL596275.2-204ENST00000641628 552 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 AC239868.2-201ENST00000564237 4527 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 OR4G2P-202ENST00000641004 1759 ntBASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RSPO4Q2I0M5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.61
RSPO4Q2I0M5 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC100757.1-201ENST00000616872 1835 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC140479.2-201ENST00000421567 3130 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 PRO1804-201ENST00000623780 2050 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 U3.10-201ENST00000364459 214 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 Y_RNA.292-201ENST00000364904 97 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 SNORA70.4-201ENST00000365509 134 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 MIR649-201ENST00000384843 97 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC096921.1-201ENST00000411661 375 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 MRPS21P2-201ENST00000424704 264 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AL732292.1-201ENST00000426692 226 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC109327.1-201ENST00000471666 403 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 RNU2-31P-201ENST00000516954 155 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC109479.2-201ENST00000517842 174 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 DPPA3P2-201ENST00000553589 478 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 MIR4273-201ENST00000582824 84 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 ELOCP5-201ENST00000604924 333 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 HSPE1P14-201ENST00000605812 302 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AL133481.2-203ENST00000607558 139 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AL596245.1-201ENST00000618994 362 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 RLIMP1-201ENST00000339626 1680 ntBASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RSPO4Q2I0M5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RNA5SP326-201ENST00000363209 110 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RNA5SP447-201ENST00000363749 119 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 Y_RNA.261-201ENST00000364631 102 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RNU6-715P-201ENST00000365204 103 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RNU6-918P-201ENST00000391219 106 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 PRRC2CP1-201ENST00000404428 159 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 ELOCP19-201ENST00000411919 318 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RPS12P5-201ENST00000423449 371 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 CRIP1P1-201ENST00000427567 185 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RPL23AP1-201ENST00000428990 471 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC092423.1-201ENST00000430165 186 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RPS29P10-201ENST00000439197 166 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 SNORD97-201ENST00000459187 142 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 ATP5LP5-201ENST00000483050 299 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC091167.1-201ENST00000492017 396 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC010469.2-201ENST00000496412 480 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC093853.1-201ENST00000515689 483 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 SNORD116-28-201ENST00000516123 91 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RN7SKP276-201ENST00000516242 268 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC010186.2-204ENST00000537668 439 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 LSM6P2-201ENST00000552208 177 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 SNORD39.2-201ENST00000579995 76 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 RN7SL690P-201ENST00000582087 240 ntBASIC5.01□□□□□ -1.61
RSPO4Q2I0M5 MIR3939-201ENST00000582614 106 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms