Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.82□□□□□ -1.8
FOXF2Q12947 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 NCAPGP2-201ENST00000557911 754 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXF2Q12947 RN7SL600P-201ENST00000581811 299 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 MIR3149-201ENST00000584629 83 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 AP001029.3-201ENST00000588063 596 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 AC010201.1-201ENST00000605051 540 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 CTHRC1P1-201ENST00000605383 469 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXF2Q12947 AC004908.2-201ENST00000609090 574 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 AC087588.2-201ENST00000617667 426 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 MIR8059-201ENST00000620427 81 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 AC140113.4-201ENST00000622087 222 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXF2Q12947 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.82□□□□□ -1.8
FOXF2Q12947 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
FOXF2Q12947 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
FOXF2Q12947 AC092435.4-201ENST00000623012 4159 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
FOXF2Q12947 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.82□□□□□ -1.8
FOXF2Q12947 EOGT-210ENST00000615922 1931 ntBASIC3.82□□□□□ -1.8
FOXF2Q12947 AC011460.1-201ENST00000636268 1834 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 SCN1A-220ENST00000641603 12506 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXF2Q12947 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXF2Q12947 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 OR1S2-201ENST00000302592 978 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RNU1-14P-201ENST00000362759 152 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RNA5SP307-201ENST00000362863 116 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 Y_RNA.197-201ENST00000364004 102 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RNY3P13-201ENST00000365542 102 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 MIR514A2-201ENST00000385131 88 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 MIR514A3-201ENST00000385132 88 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 MTCYBP4-201ENST00000401524 249 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RNU6-193P-201ENST00000410977 107 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RNU6-1304P-201ENST00000411374 106 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC009310.1-201ENST00000414414 451 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXF2Q12947 PMCHL1-202ENST00000423102 261 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC137499.1-201ENST00000427602 88 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RPS3AP52-201ENST00000435639 297 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 AC127537.2-201ENST00000439258 465 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC108734.1-201ENST00000439549 399 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC239809.1-201ENST00000450470 217 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RNU7-152P-201ENST00000458982 64 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RPL21P99-201ENST00000480369 423 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 HSPD1P15-201ENST00000505573 1122 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 FAM206BP-201ENST00000510179 541 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC114797.1-201ENST00000514003 728 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXF2Q12947 Y_RNA.665-201ENST00000516177 98 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AF186190.1-201ENST00000517470 480 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 RPL7P20-201ENST00000520308 745 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXF2Q12947 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXF2Q12947 AC063950.1-201ENST00000552036 308 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 SNRPGP18-201ENST00000553000 214 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXF2Q12947 AC068446.3-201ENST00000555285 382 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXF2Q12947 RPL21P7-201ENST00000557463 483 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC004817.2-201ENST00000561794 651 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXF2Q12947 GLUD1P4-201ENST00000590914 418 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXF2Q12947 VN1R85P-201ENST00000601587 426 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AL008729.2-201ENST00000606393 473 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 OR6R2P-201ENST00000609216 300 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AL442067.1-201ENST00000613261 223 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 uc_338.12-201ENST00000616344 181 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 MIR6864-201ENST00000617935 70 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 AC007546.1-201ENST00000619452 559 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 MIR492-201ENST00000638676 116 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC01109-201ENST00000603837 3081 ntBASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXF2Q12947 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.81□□□□□ -1.8
FOXF2Q12947 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXF2Q12947 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXF2Q12947 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXF2Q12947 AC067945.1-201ENST00000342609 618 ntBASIC3.8□□□□□ -1.8
FOXF2Q12947 RNU1-94P-201ENST00000362627 173 ntBASIC3.8□□□□□ -1.8
FOXF2Q12947 Y_RNA.301-201ENST00000364990 103 ntBASIC3.8□□□□□ -1.8
FOXF2Q12947 RNU4-66P-201ENST00000365199 138 ntBASIC3.8□□□□□ -1.8
FOXF2Q12947 Y_RNA.367-201ENST00000365544 101 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms