Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL445487.1-201ENST00000415694 1580 ntBASIC4.02□□□□□ -1.77
NKX6-1P78426 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX6-1P78426 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX6-1P78426 ZNF137P-201ENST00000456718 1920 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX6-1P78426 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX6-1P78426 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AC067945.1-201ENST00000342609 618 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RNU6-600P-201ENST00000362524 99 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RNU6-451P-201ENST00000362921 107 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RNU6-61P-201ENST00000365528 109 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 SNORA70C-201ENST00000384538 135 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 SNORD96B-201ENST00000386148 79 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 MT-TL1-201ENST00000386347 75 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AL354719.1-201ENST00000406535 843 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RNA5SP239-201ENST00000410218 129 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RNU6-1068P-201ENST00000410958 103 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RN7SKP140-201ENST00000411196 284 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AL161631.1-201ENST00000417933 486 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX6-1P78426 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX6-1P78426 FTH1P6-201ENST00000430768 320 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX6-1P78426 RPS26P2-201ENST00000440331 348 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 AC073415.1-201ENST00000449240 153 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 AC010469.1-201ENST00000463864 576 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AL049874.1-201ENST00000489560 388 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 RN7SL604P-201ENST00000492589 296 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX6-1P78426 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AP006587.4-201ENST00000526053 529 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 AC103843.2-201ENST00000530523 682 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 OR5B10P-201ENST00000532869 642 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AC106785.1-201ENST00000565935 262 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 AC024619.4-201ENST00000580924 316 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 ARF4P1-201ENST00000605447 541 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 AC008945.2-201ENST00000606056 604 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 AP001486.3-201ENST00000615334 372 ntBASIC4.01□□□□□ -1.77
NKX6-1P78426 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NKX6-1P78426 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NKX6-1P78426 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.01□□□□□ -1.77
NKX6-1P78426 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.01□□□□□ -1.77
NKX6-1P78426 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4□□□□□ -1.77
NKX6-1P78426 RAD17P1-201ENST00000418130 2042 ntBASIC4□□□□□ -1.77
NKX6-1P78426 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NKX6-1P78426 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NKX6-1P78426 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4□□□□□ -1.77
NKX6-1P78426 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NKX6-1P78426 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NKX6-1P78426 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4□□□□□ -1.77
NKX6-1P78426 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4□□□□□ -1.77
NKX6-1P78426 RNU6-1287P-201ENST00000362914 107 ntBASIC4□□□□□ -1.77
NKX6-1P78426 RNU6-1060P-201ENST00000384664 107 ntBASIC4□□□□□ -1.77
NKX6-1P78426 MIR134-201ENST00000385258 73 ntBASIC4□□□□□ -1.77
NKX6-1P78426 SOD2P1-201ENST00000396543 562 ntBASIC4□□□□□ -1.77
NKX6-1P78426 Z98745.1-201ENST00000402553 494 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AL136116.1-201ENST00000403591 381 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AL160275.2-201ENST00000412010 394 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AC138393.2-201ENST00000414742 246 ntBASIC4□□□□□ -1.77
NKX6-1P78426 RPL27AP8-201ENST00000424277 446 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AL356867.1-201ENST00000429623 299 ntBASIC4□□□□□ -1.77
NKX6-1P78426 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4□□□□□ -1.77
NKX6-1P78426 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4□□□□□ -1.77
NKX6-1P78426 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4□□□□□ -1.77
NKX6-1P78426 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC104806.1-201ENST00000508720 308 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 RN7SKP219-201ENST00000516825 296 ntBASIC4□□□□□ -1.77
NKX6-1P78426 RNU6-677P-201ENST00000516914 101 ntBASIC4□□□□□ -1.77
NKX6-1P78426 RANP3-201ENST00000530970 276 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC005951.2-201ENST00000576282 495 ntBASIC4□□□□□ -1.77
NKX6-1P78426 MIR4703-201ENST00000577728 79 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4□□□□□ -1.77
NKX6-1P78426 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 AC015917.1-201ENST00000579654 510 ntBASIC4□□□□□ -1.77
NKX6-1P78426 MIR3138-201ENST00000585238 82 ntBASIC4□□□□□ -1.77
NKX6-1P78426 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4□□□□□ -1.77
NKX6-1P78426 AL365204.3-201ENST00000612448 685 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AC011155.2-201ENST00000623202 216 ntBASIC4□□□□□ -1.77
NKX6-1P78426 AC034229.5-201ENST00000624258 185 ntBASIC4□□□□□ -1.77
NKX6-1P78426 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4□□□□□ -1.77
NKX6-1P78426 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4□□□□□ -1.77
NKX6-1P78426 U3.53-201ENST00000628922 216 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms