Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.8□□□□□ -1.8
TM4SF1P30408 AC112187.2-201ENST00000604345 283 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AC018714.1-201ENST00000605028 208 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AC106028.5-201ENST00000610332 395 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AL355810.1-201ENST00000614629 552 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 PCMTD1P7-201ENST00000634506 357 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 AC099063.3-201ENST00000642066 185 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.8□□□□□ -1.8
TM4SF1P30408 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TM4SF1P30408 AL031985.3-201ENST00000565390 2449 ntBASIC3.8□□□□□ -1.8
TM4SF1P30408 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TM4SF1P30408 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM4SF1P30408 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TM4SF1P30408 AC073325.2-201ENST00000339545 159 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 RNU6-777P-201ENST00000364265 104 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 RNU6-1078P-201ENST00000364522 103 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 RPS4XP8-201ENST00000402039 771 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AL645937.1-202ENST00000421799 937 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AL593851.1-201ENST00000426171 157 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.79□□□□□ -1.8
TM4SF1P30408 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.79□□□□□ -1.8
TM4SF1P30408 LSM1P1-201ENST00000438629 273 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.79□□□□□ -1.8
TM4SF1P30408 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF1P30408 MRPS33P3-201ENST00000513456 322 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC017037.2-201ENST00000513850 890 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC022483.1-201ENST00000514020 567 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 RN7SKP272-201ENST00000516988 232 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.79□□□□□ -1.8
TM4SF1P30408 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF1P30408 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.79□□□□□ -1.8
TM4SF1P30408 AP004247.1-201ENST00000531556 1289 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.79□□□□□ -1.8
TM4SF1P30408 MRPS36P5-201ENST00000551909 298 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 TGIF1P1-201ENST00000558095 802 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.79□□□□□ -1.8
TM4SF1P30408 AP001004.1-201ENST00000582468 324 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC090616.2-202ENST00000584248 222 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AL139344.1-201ENST00000605228 195 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AL034351.1-201ENST00000605288 668 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC018638.7-201ENST00000605836 1114 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.79□□□□□ -1.8
TM4SF1P30408 IGHVIII-44-202ENST00000636235 289 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 MIR4275-201ENST00000636486 87 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 AC007671.2-201ENST00000637344 619 ntBASIC3.79□□□□□ -1.8
TM4SF1P30408 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
TM4SF1P30408 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TM4SF1P30408 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TM4SF1P30408 U3.20-201ENST00000390909 217 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC110754.1-201ENST00000399740 601 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 RNU4-65P-201ENST00000410473 140 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC011233.1-201ENST00000422812 283 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC079780.1-201ENST00000428259 207 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 MTND1P20-201ENST00000430341 950 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 AL117351.1-201ENST00000438864 766 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 RAC1P7-201ENST00000445367 377 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 SNORD121B-201ENST00000458838 81 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 RPS4XP22-201ENST00000480755 780 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC079600.2-201ENST00000550076 130 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.78□□□□□ -1.8
TM4SF1P30408 OR4K8P-201ENST00000578842 1048 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.78□□□□□ -1.8
TM4SF1P30408 AC008751.2-201ENST00000597885 980 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AL353778.1-201ENST00000603149 408 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC012443.1-201ENST00000605605 231 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AL360219.1-201ENST00000610230 366 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC004223.4-201ENST00000612426 332 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 MIR6130-201ENST00000619419 109 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AL353748.2-201ENST00000622148 471 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AL359715.5-201ENST00000623431 443 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AC095031.1-201ENST00000623685 672 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 AL159972.1-201ENST00000625150 448 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TM4SF1P30408 EXOC5P1-201ENST00000510543 1969 ntBASIC3.78□□□□□ -1.8
TM4SF1P30408 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.78□□□□□ -1.81
TM4SF1P30408 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.81
TM4SF1P30408 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
TM4SF1P30408 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TM4SF1P30408 TAB3P1-202ENST00000452645 1634 ntBASIC3.77□□□□□ -1.81
TM4SF1P30408 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms