Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SNHG22-203ENST00000617833 660 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.7□□□□□ -1.66
CNGA1P29973 USP8P1-201ENST00000494673 3183 ntBASIC4.7□□□□□ -1.66
CNGA1P29973 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CNGA1P29973 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.7□□□□□ -1.66
CNGA1P29973 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CNGA1P29973 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CNGA1P29973 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
CNGA1P29973 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CNGA1P29973 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 Y_RNA.159-201ENST00000363674 87 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 RNU6-39P-201ENST00000384344 107 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC110754.1-201ENST00000399740 601 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 CALM2P3-201ENST00000400429 449 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 RNA5SP239-201ENST00000410218 129 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 HSPE1P12-201ENST00000412576 301 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 RAB9AP3-201ENST00000412737 573 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 RAC1P3-201ENST00000416129 580 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.69□□□□□ -1.66
CNGA1P29973 FTH1P6-201ENST00000430768 320 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 GPR143P-201ENST00000434155 205 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 MTATP6P13-201ENST00000438531 667 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.69□□□□□ -1.66
CNGA1P29973 GAPDHP27-201ENST00000447427 1020 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 RAB9AP1-201ENST00000449393 573 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC006480.1-201ENST00000449887 378 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC140076.1-201ENST00000449897 361 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AL451050.1-201ENST00000450126 415 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 snoU13.4-201ENST00000458916 104 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 RPS27AP1-201ENST00000475545 471 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.69□□□□□ -1.66
CNGA1P29973 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.69□□□□□ -1.66
CNGA1P29973 RNU2-10P-201ENST00000516375 211 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 ERHP1-201ENST00000523006 310 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 FAM60DP-201ENST00000524174 632 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 SNRPGP16-201ENST00000533275 226 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.69□□□□□ -1.66
CNGA1P29973 AC006064.5-201ENST00000541782 248 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.69□□□□□ -1.66
CNGA1P29973 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.69□□□□□ -1.66
CNGA1P29973 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.69□□□□□ -1.66
CNGA1P29973 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.69□□□□□ -1.66
CNGA1P29973 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.69□□□□□ -1.66
CNGA1P29973 GLUD1P4-201ENST00000590914 418 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.69□□□□□ -1.66
CNGA1P29973 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.69□□□□□ -1.66
CNGA1P29973 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.69□□□□□ -1.66
CNGA1P29973 MIR4727-201ENST00000622232 55 ntBASIC4.69□□□□□ -1.66
CNGA1P29973 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.69□□□□□ -1.66
CNGA1P29973 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNGA1P29973 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CNGA1P29973 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.69□□□□□ -1.66
CNGA1P29973 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CNGA1P29973 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CNGA1P29973 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.68□□□□□ -1.66
CNGA1P29973 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNGA1P29973 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.68□□□□□ -1.66
CNGA1P29973 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNGA1P29973 AC067945.1-201ENST00000342609 618 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.68□□□□□ -1.66
CNGA1P29973 RNU1-15P-201ENST00000353977 144 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 RNU6-1097P-201ENST00000363586 107 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CNGA1P29973 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CNGA1P29973 AL359634.1-202ENST00000404721 284 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 RNU2-36P-201ENST00000410361 191 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 RBMY1KP-201ENST00000423480 476 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.68□□□□□ -1.66
CNGA1P29973 AC104164.2-201ENST00000496953 495 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 RPL23AP55-201ENST00000498163 452 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 AC019235.1-201ENST00000503847 207 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 VN1R104P-201ENST00000505115 1009 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 PPBPP1-201ENST00000510807 373 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.68□□□□□ -1.66
CNGA1P29973 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNGA1P29973 AC012468.1-201ENST00000604888 430 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 AL592436.1-201ENST00000605135 558 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 SNORA51-201ENST00000606420 132 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.68□□□□□ -1.66
CNGA1P29973 AC084757.4-201ENST00000616350 526 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 AC012314.7-201ENST00000619693 93 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 C2orf27A-204ENST00000623058 969 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 AL160394.1-201ENST00000624765 724 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNGA1P29973 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.68□□□□□ -1.66
CNGA1P29973 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNGA1P29973 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
CNGA1P29973 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNGA1P29973 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNGA1P29973 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNGA1P29973 AC092326.2-201ENST00000624772 1561 ntBASIC4.67□□□□□ -1.66
CNGA1P29973 SNORD74.4-201ENST00000364129 80 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms