Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
SHC1P29353 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SHC1P29353 SNORD42A-201ENST00000459584 64 ntBASIC3.06□□□□□ -1.92
SHC1P29353 RPS27P29-201ENST00000463110 252 ntBASIC3.06□□□□□ -1.92
SHC1P29353 TMED11P-201ENST00000479478 690 ntBASIC3.06□□□□□ -1.92
SHC1P29353 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.06□□□□□ -1.92
SHC1P29353 AC093663.1-201ENST00000497190 394 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC109927.2-201ENST00000506416 303 ntBASIC3.06□□□□□ -1.92
SHC1P29353 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 RNA5SP216-201ENST00000516111 123 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC134698.4-201ENST00000523451 826 ntBASIC3.06□□□□□ -1.92
SHC1P29353 OR5G4P-201ENST00000525251 760 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC013828.2-201ENST00000532487 235 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.06□□□□□ -1.92
SHC1P29353 HSPE1P3-201ENST00000559254 309 ntBASIC3.06□□□□□ -1.92
SHC1P29353 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 MIR5697-201ENST00000578045 78 ntBASIC3.06□□□□□ -1.92
SHC1P29353 MAGOH2P-202ENST00000584384 429 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.06□□□□□ -1.92
SHC1P29353 BNIP3P23-201ENST00000599655 511 ntBASIC3.06□□□□□ -1.92
SHC1P29353 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.06□□□□□ -1.92
SHC1P29353 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 AL355365.1-201ENST00000616480 294 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC244100.1-202ENST00000621554 382 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC095031.1-201ENST00000623685 672 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AL356274.2-201ENST00000624379 3752 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AC093591.3-201ENST00000634516 308 ntBASIC3.06□□□□□ -1.92
SHC1P29353 CRYM-AS1-204ENST00000637983 556 ntBASIC3.06□□□□□ -1.92
SHC1P29353 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.06□□□□□ -1.92
SHC1P29353 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHC1P29353 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
SHC1P29353 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
SHC1P29353 RNU1-33P-201ENST00000364249 162 ntBASIC3.05□□□□□ -1.92
SHC1P29353 SNORA7.2-201ENST00000364446 145 ntBASIC3.05□□□□□ -1.92
SHC1P29353 MIR607-201ENST00000385241 96 ntBASIC3.05□□□□□ -1.92
SHC1P29353 U8.14-201ENST00000390843 143 ntBASIC3.05□□□□□ -1.92
SHC1P29353 HMGB1P17-201ENST00000403495 628 ntBASIC3.05□□□□□ -1.92
SHC1P29353 RNU6-248P-201ENST00000410720 107 ntBASIC3.05□□□□□ -1.92
SHC1P29353 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.05□□□□□ -1.92
SHC1P29353 AL356968.1-201ENST00000416622 474 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC244098.2-201ENST00000422068 99 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.05□□□□□ -1.92
SHC1P29353 AL451062.2-201ENST00000427515 271 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC097713.2-201ENST00000430199 356 ntBASIC3.05□□□□□ -1.92
SHC1P29353 OR2B8P-201ENST00000432841 938 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.05□□□□□ -1.92
SHC1P29353 RPL23AP16-201ENST00000441715 421 ntBASIC3.05□□□□□ -1.92
SHC1P29353 BTF3P5-201ENST00000457252 467 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC034236.1-201ENST00000469891 373 ntBASIC3.05□□□□□ -1.92
SHC1P29353 RPL31P50-201ENST00000471002 296 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC017015.1-201ENST00000477387 286 ntBASIC3.05□□□□□ -1.92
SHC1P29353 RPL31P13-201ENST00000484151 370 ntBASIC3.05□□□□□ -1.92
SHC1P29353 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.05□□□□□ -1.92
SHC1P29353 RNF138P1-201ENST00000502765 546 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC138853.1-201ENST00000503549 823 ntBASIC3.05□□□□□ -1.92
SHC1P29353 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHC1P29353 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHC1P29353 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.05□□□□□ -1.92
SHC1P29353 POU5F1P7-201ENST00000508759 541 ntBASIC3.05□□□□□ -1.92
SHC1P29353 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 AC093809.1-201ENST00000509155 340 ntBASIC3.05□□□□□ -1.92
SHC1P29353 TXNP6-201ENST00000510190 310 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.05□□□□□ -1.92
SHC1P29353 AC107934.2-201ENST00000518653 310 ntBASIC3.05□□□□□ -1.92
SHC1P29353 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.05□□□□□ -1.92
SHC1P29353 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.05□□□□□ -1.92
SHC1P29353 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.05□□□□□ -1.92
SHC1P29353 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.05□□□□□ -1.92
SHC1P29353 MIR4307-201ENST00000582802 84 ntBASIC3.05□□□□□ -1.92
SHC1P29353 PRELID3BP8-201ENST00000604148 295 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AL009028.1-201ENST00000604895 802 ntBASIC3.05□□□□□ -1.92
SHC1P29353 BCRP9-201ENST00000605312 388 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.05□□□□□ -1.92
SHC1P29353 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.05□□□□□ -1.92
SHC1P29353 AC069200.1-201ENST00000609511 323 ntBASIC3.05□□□□□ -1.92
SHC1P29353 MIR7975-201ENST00000619350 68 ntBASIC3.05□□□□□ -1.92
SHC1P29353 AC099654.12-201ENST00000639868 649 ntBASIC3.05□□□□□ -1.92
SHC1P29353 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
SHC1P29353 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHC1P29353 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHC1P29353 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
SHC1P29353 AL022578.1-201ENST00000439330 1433 ntBASIC3.04□□□□□ -1.92
SHC1P29353 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHC1P29353 RNU6-343P-201ENST00000364709 104 ntBASIC3.04□□□□□ -1.92
SHC1P29353 SNORA40.3-201ENST00000390964 122 ntBASIC3.04□□□□□ -1.92
SHC1P29353 HSPE1P26-201ENST00000405341 275 ntBASIC3.04□□□□□ -1.92
SHC1P29353 MIR320C1-201ENST00000408566 88 ntBASIC3.04□□□□□ -1.92
SHC1P29353 HMGN1P14-201ENST00000412459 517 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AL133384.1-201ENST00000412744 351 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms