Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD8P13378 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD8P13378 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HOXD8P13378 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD8P13378 MAPK10-328ENST00000641553 4009 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 TLK1P1-201ENST00000456760 2440 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD8P13378 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD8P13378 MAPK10-263ENST00000641052 4307 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 AC068538.1-201ENST00000376856 336 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXD8P13378 RNU6-754P-201ENST00000391166 107 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 RNU2-21P-201ENST00000410368 188 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 ELOCP19-201ENST00000411919 318 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD8P13378 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD8P13378 AL359672.1-201ENST00000442302 409 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 AC245028.2-201ENST00000458673 253 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 SNORD5.1-201ENST00000458800 75 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 RPL9P32-201ENST00000464118 620 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 AC091868.1-201ENST00000508746 304 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 RNU2-53P-201ENST00000516257 147 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 RNU1-6P-201ENST00000516290 144 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 RNU4-77P-201ENST00000516692 156 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 AC100870.1-201ENST00000522035 505 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 CYCSP27-201ENST00000527643 293 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD8P13378 AP000889.1-201ENST00000530968 660 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 AC133555.2-201ENST00000550213 292 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 SETP7-201ENST00000552169 453 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD8P13378 AC110743.1-201ENST00000584870 478 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 IGHV3-29-201ENST00000604817 344 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD8P13378 MIR8062-201ENST00000621515 85 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD8P13378 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD8P13378 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HOXD8P13378 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXD8P13378 AP000756.2-201ENST00000624168 2567 ntBASIC5.36□□□□□ -1.55
HOXD8P13378 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
HOXD8P13378 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXD8P13378 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXD8P13378 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXD8P13378 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 DDX10P1-201ENST00000448545 1933 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXD8P13378 RNU6-1059P-201ENST00000363752 98 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 RNA5SP187-201ENST00000384400 119 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 RNU6-55P-201ENST00000411092 107 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD8P13378 RPS17P8-201ENST00000434525 335 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 AC133473.1-201ENST00000455173 299 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 VN1R105P-201ENST00000486595 910 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 DEFB109F-201ENST00000491870 277 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD8P13378 RPL23AP53-201ENST00000521854 457 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXD8P13378 ATP5J2P6-201ENST00000565203 266 ntBASIC5.35□□□□□ -1.55
HOXD8P13378 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD8P13378 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXD8P13378 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXD8P13378 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXD8P13378 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD8P13378 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 EIF2AP4-201ENST00000424793 1781 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD8P13378 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 SNORD14.1-201ENST00000365609 90 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 MT-TC-201ENST00000387405 66 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 MRPS18CP6-201ENST00000423587 223 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 ARL5AP4-201ENST00000430731 512 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 RPS15AP10-201ENST00000432472 382 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD8P13378 RPL21P2-201ENST00000440049 481 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD8P13378 AC007967.1-201ENST00000455422 1159 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AC087884.1-201ENST00000469738 328 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 RPS23P3-201ENST00000470993 430 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 RPL21P103-201ENST00000479921 488 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXD8P13378 MTCO3P44-201ENST00000510977 541 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AC005798.1-201ENST00000513715 387 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 IGHV3-76-201ENST00000522465 295 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms