Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-507P-201ENST00000516045 100 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 MTND1P35-201ENST00000526739 508 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC109635.3-201ENST00000529536 185 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC024224.1-201ENST00000538284 609 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AL512360.1-201ENST00000555346 234 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.58□□□□□ -1.68
SNRPA1P09661 AC005730.3-201ENST00000583067 366 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 BRDTP1-201ENST00000605735 677 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC008536.2-201ENST00000607284 349 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 AL133173.2-201ENST00000614270 90 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 AC104985.2-201ENST00000620598 500 ntBASIC4.58□□□□□ -1.68
SNRPA1P09661 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SNRPA1P09661 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.58□□□□□ -1.68
SNRPA1P09661 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.58□□□□□ -1.68
SNRPA1P09661 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNRPA1P09661 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNRPA1P09661 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 CASC19-280ENST00000642102 1351 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 RNU4-35P-201ENST00000362588 141 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 Y_RNA.89-201ENST00000363031 102 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RNU6-181P-201ENST00000363225 107 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RNU6-534P-201ENST00000364877 106 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RNU6-730P-201ENST00000383954 104 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 MIR483-201ENST00000385070 76 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 SNORD17-201ENST00000390930 237 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 MRPL42P2-201ENST00000403169 426 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AL356421.1-201ENST00000403255 413 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.57□□□□□ -1.68
SNRPA1P09661 NUP35P2-201ENST00000416748 943 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 MTND3P17-201ENST00000416968 344 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AL590233.1-201ENST00000430017 456 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 MTND1P12-201ENST00000455231 147 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RN7SL601P-201ENST00000471221 293 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC087312.1-201ENST00000471411 480 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC022795.1-201ENST00000473808 480 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RPL32P34-201ENST00000486380 400 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC025445.1-201ENST00000502728 300 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC093677.1-201ENST00000514414 678 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RN7SKP82-201ENST00000516786 223 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 RNU6-445P-201ENST00000516949 107 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AP001646.1-201ENST00000527936 915 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.57□□□□□ -1.68
SNRPA1P09661 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AL353997.4-201ENST00000586196 166 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AC011468.4-201ENST00000603942 409 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC010680.3-201ENST00000604215 520 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AL391813.2-201ENST00000609113 322 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AC063943.3-201ENST00000615562 356 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 U4.6-201ENST00000621618 127 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AP003355.3-201ENST00000623465 114 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
SNRPA1P09661 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNRPA1P09661 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.57□□□□□ -1.68
SNRPA1P09661 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNRPA1P09661 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AL161781.1-201ENST00000354277 403 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 RNU6-797P-201ENST00000363101 109 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 RNU6-1085P-201ENST00000363576 107 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 RNU6-483P-201ENST00000384088 108 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AL359704.1-201ENST00000411586 781 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.56□□□□□ -1.68
SNRPA1P09661 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AL353777.1-201ENST00000425552 326 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 SDCBPP1-201ENST00000440192 890 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC132479.1-201ENST00000449160 144 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 HMGB1P15-201ENST00000453854 435 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 RPL21P10-201ENST00000463521 490 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC069499.1-201ENST00000489433 509 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC026427.2-201ENST00000506228 536 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.56□□□□□ -1.68
SNRPA1P09661 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 SNORA74D-201ENST00000516404 141 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 RNU6-579P-201ENST00000516879 102 ntBASIC4.56□□□□□ -1.68
SNRPA1P09661 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.56□□□□□ -1.68
SNRPA1P09661 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms