Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC022968.1-201ENST00000567372 442 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFAP04085 AC022884.2-201ENST00000578535 580 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 MIR1273C-201ENST00000578669 77 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 AC006116.3-201ENST00000592968 361 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFAP04085 MIR6820-201ENST00000611508 62 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 EIF3FP1-201ENST00000613970 806 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 RMST_4.1-201ENST00000616886 107 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AC006065.5-201ENST00000623427 349 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFAP04085 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDGFAP04085 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDGFAP04085 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
PDGFAP04085 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFAP04085 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFAP04085 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFAP04085 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFAP04085 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFAP04085 RN7SKP103-201ENST00000363848 320 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 RNU6-395P-201ENST00000365662 106 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 DUTP5-201ENST00000406790 469 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 RNU6-1156P-201ENST00000410365 100 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 CTSL3P-202ENST00000412179 788 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AL356968.1-201ENST00000416622 474 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 MTCO1P39-201ENST00000426148 480 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 USP9YP7-201ENST00000436723 430 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFAP04085 USP9YP32-201ENST00000452432 430 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AL389915.2-201ENST00000454576 441 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFAP04085 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFAP04085 AC108860.1-201ENST00000484521 383 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 RN7SL447P-201ENST00000494711 245 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AC113155.1-201ENST00000511141 769 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AL671862.1-201ENST00000515851 349 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 MIR892C-201ENST00000516410 77 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 Y_RNA.715-201ENST00000517082 110 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AC012339.2-201ENST00000523996 453 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.09□□□□□ -1.59
PDGFAP04085 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.09□□□□□ -1.59
PDGFAP04085 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.09□□□□□ -1.59
PDGFAP04085 AL157871.3-201ENST00000557231 293 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.09□□□□□ -1.59
PDGFAP04085 RNA5SP108-201ENST00000605921 117 ntBASIC5.09□□□□□ -1.59
PDGFAP04085 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFAP04085 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFAP04085 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDGFAP04085 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.09□□□□□ -1.59
PDGFAP04085 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.09□□□□□ -1.6
PDGFAP04085 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFAP04085 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
PDGFAP04085 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.6
PDGFAP04085 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDGFAP04085 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.08□□□□□ -1.6
PDGFAP04085 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDGFAP04085 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 RNA5SP305-201ENST00000362665 119 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 RN7SKP224-201ENST00000364140 325 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 RNA5SP223-201ENST00000365174 120 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 Y_RNA.512-201ENST00000384518 102 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 LAP3P1-201ENST00000403648 294 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 RNU6-325P-201ENST00000411132 105 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 EIF4A1P3-201ENST00000411521 244 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 AF186996.5-201ENST00000418098 904 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFAP04085 RPS15AP10-201ENST00000432472 382 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFAP04085 AC105399.1-202ENST00000447303 205 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 AC073850.1-201ENST00000449243 255 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 PCNPP5-201ENST00000452246 481 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFAP04085 AC093852.1-201ENST00000503587 266 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.08□□□□□ -1.6
PDGFAP04085 HNRNPCP4-201ENST00000571636 900 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 AC005357.1-201ENST00000588399 301 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 MIR8062-201ENST00000621515 85 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 FP236240.3-201ENST00000623061 327 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.08□□□□□ -1.6
PDGFAP04085 MTND5P7-201ENST00000413558 1798 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDGFAP04085 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 MTND5P27-201ENST00000428871 1720 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PDGFAP04085 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.08□□□□□ -1.6
PDGFAP04085 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDGFAP04085 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PDGFAP04085 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDGFAP04085 RNY1P16-201ENST00000363063 111 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 Y_RNA.126-201ENST00000363382 111 ntBASIC5.07□□□□□ -1.6
PDGFAP04085 RNU6-512P-201ENST00000364438 103 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms