Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AIMP1P1-201ENST00000418670 937 ntBASIC3.33□□□□□ -1.88
VTNP04004 MTCO2P5-201ENST00000422621 426 ntBASIC3.33□□□□□ -1.88
VTNP04004 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 MED14P1-201ENST00000430517 648 ntBASIC3.33□□□□□ -1.88
VTNP04004 UBE2FP3-201ENST00000436366 524 ntBASIC3.33□□□□□ -1.88
VTNP04004 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTNP04004 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 RPL7P52-201ENST00000449200 742 ntBASIC3.33□□□□□ -1.88
VTNP04004 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.33□□□□□ -1.88
VTNP04004 AC068305.1-201ENST00000497406 726 ntBASIC3.33□□□□□ -1.88
VTNP04004 RPL23AP55-201ENST00000498163 452 ntBASIC3.33□□□□□ -1.88
VTNP04004 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 AC105313.1-201ENST00000509121 353 ntBASIC3.33□□□□□ -1.88
VTNP04004 AC010625.1-201ENST00000511296 403 ntBASIC3.33□□□□□ -1.88
VTNP04004 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 AC034159.1-201ENST00000513885 583 ntBASIC3.33□□□□□ -1.88
VTNP04004 RNU6-27P-201ENST00000516146 107 ntBASIC3.33□□□□□ -1.88
VTNP04004 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 AC087276.1-201ENST00000529659 480 ntBASIC3.33□□□□□ -1.88
VTNP04004 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.33□□□□□ -1.88
VTNP04004 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 PIGPP4-201ENST00000584447 307 ntBASIC3.33□□□□□ -1.88
VTNP04004 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.33□□□□□ -1.88
VTNP04004 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.33□□□□□ -1.88
VTNP04004 AC106028.5-201ENST00000610332 395 ntBASIC3.33□□□□□ -1.88
VTNP04004 MIR7106-201ENST00000612419 65 ntBASIC3.33□□□□□ -1.88
VTNP04004 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
VTNP04004 MIR6852-201ENST00000621699 66 ntBASIC3.33□□□□□ -1.88
VTNP04004 AC091925.2-201ENST00000625059 256 ntBASIC3.33□□□□□ -1.88
VTNP04004 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.33□□□□□ -1.88
VTNP04004 AP001350.1-201ENST00000601906 1524 ntBASIC3.33□□□□□ -1.88
VTNP04004 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTNP04004 RNU6-1249P-201ENST00000363237 111 ntBASIC3.32□□□□□ -1.88
VTNP04004 RNU6-7-201ENST00000364784 107 ntBASIC3.32□□□□□ -1.88
VTNP04004 RNU6-8-201ENST00000365467 107 ntBASIC3.32□□□□□ -1.88
VTNP04004 RNU6-1181P-201ENST00000384191 106 ntBASIC3.32□□□□□ -1.88
VTNP04004 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VTNP04004 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
VTNP04004 RPL23AP39-201ENST00000415533 405 ntBASIC3.32□□□□□ -1.88
VTNP04004 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
VTNP04004 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.32□□□□□ -1.88
VTNP04004 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
VTNP04004 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.32□□□□□ -1.88
VTNP04004 MTCYBP45-201ENST00000435243 565 ntBASIC3.32□□□□□ -1.88
VTNP04004 MTND4P32-201ENST00000437189 1237 ntBASIC3.32□□□□□ -1.88
VTNP04004 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
VTNP04004 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.32□□□□□ -1.88
VTNP04004 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
VTNP04004 AL445669.2-201ENST00000454425 421 ntBASIC3.32□□□□□ -1.88
VTNP04004 HMGB1P25-201ENST00000468402 607 ntBASIC3.32□□□□□ -1.88
VTNP04004 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.32□□□□□ -1.88
VTNP04004 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 AC006390.1-201ENST00000508068 283 ntBASIC3.32□□□□□ -1.88
VTNP04004 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VTNP04004 MTND5P13-201ENST00000513046 1079 ntBASIC3.32□□□□□ -1.88
VTNP04004 RN7SKP244-201ENST00000516513 307 ntBASIC3.32□□□□□ -1.88
VTNP04004 AC106038.2-201ENST00000520706 568 ntBASIC3.32□□□□□ -1.88
VTNP04004 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.32□□□□□ -1.88
VTNP04004 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
VTNP04004 AC013828.2-201ENST00000532487 235 ntBASIC3.32□□□□□ -1.88
VTNP04004 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.32□□□□□ -1.88
VTNP04004 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 AC136618.2-201ENST00000575091 400 ntBASIC3.32□□□□□ -1.88
VTNP04004 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.32□□□□□ -1.88
VTNP04004 AC008507.1-201ENST00000587506 734 ntBASIC3.32□□□□□ -1.88
VTNP04004 XIAPP1-201ENST00000603162 600 ntBASIC3.32□□□□□ -1.88
VTNP04004 AL390208.1-201ENST00000605885 644 ntBASIC3.32□□□□□ -1.88
VTNP04004 AC048347.1-201ENST00000624621 427 ntBASIC3.32□□□□□ -1.88
VTNP04004 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
VTNP04004 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.32□□□□□ -1.88
VTNP04004 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTNP04004 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VTNP04004 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VTNP04004 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VTNP04004 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.31□□□□□ -1.88
VTNP04004 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 SNORA26.8-201ENST00000391306 124 ntBASIC3.31□□□□□ -1.88
VTNP04004 RPS3AP26-201ENST00000398259 784 ntBASIC3.31□□□□□ -1.88
VTNP04004 MTCYBP36-201ENST00000404146 440 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC109780.2-201ENST00000413467 845 ntBASIC3.31□□□□□ -1.88
VTNP04004 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.31□□□□□ -1.88
VTNP04004 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 AC007742.1-201ENST00000425789 329 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.31□□□□□ -1.88
VTNP04004 ELOCP26-201ENST00000436067 329 ntBASIC3.31□□□□□ -1.88
VTNP04004 LARP1BP3-201ENST00000437229 869 ntBASIC3.31□□□□□ -1.88
VTNP04004 SDCBPP1-201ENST00000440192 890 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.31□□□□□ -1.88
VTNP04004 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.31□□□□□ -1.88
VTNP04004 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.31□□□□□ -1.88
VTNP04004 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms