Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 HMGB2P1-201ENST00000591146 634 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AC006116.10-201ENST00000591836 581 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 XIAPP1-201ENST00000603162 600 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AC020910.3-201ENST00000603701 874 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AP001330.4-201ENST00000604350 154 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 FAM25E-202ENST00000608562 189 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AC004696.1-201ENST00000614345 607 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 CR381572.2-201ENST00000624852 397 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40AO75400 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40AO75400 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40AO75400 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF40AO75400 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU1-108P-201ENST00000362556 161 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU6-1252P-201ENST00000363054 104 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 Y_RNA.259-201ENST00000364619 101 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40AO75400 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU6-1297P-201ENST00000384415 104 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AL591848.1-201ENST00000413092 322 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF40AO75400 NDUFA5P4-201ENST00000436704 385 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF40AO75400 AC020550.1-201ENST00000447385 163 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40AO75400 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.34□□□□□ -1.55
PRPF40AO75400 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.34□□□□□ -1.55
PRPF40AO75400 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF40AO75400 RPL39P5-202ENST00000512505 151 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU6-189P-201ENST00000516120 101 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU6-559P-201ENST00000516151 98 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 Y_RNA.682-201ENST00000516457 100 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU6-352P-201ENST00000516908 107 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 RNU6-677P-201ENST00000516914 101 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AP000889.2-201ENST00000532684 490 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40AO75400 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40AO75400 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.34□□□□□ -1.55
PRPF40AO75400 MIR3942-201ENST00000585264 109 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC104763.2-201ENST00000604179 382 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 HMGN2P28-201ENST00000606102 262 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 Z82243.1-201ENST00000609432 473 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC131238.1-201ENST00000617135 328 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC091953.3-201ENST00000623220 236 ntBASIC5.34□□□□□ -1.55
PRPF40AO75400 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PRPF40AO75400 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF40AO75400 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
PRPF40AO75400 AC012618.3-205ENST00000637896 1496 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PRPF40AO75400 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF40AO75400 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40AO75400 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40AO75400 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRPF40AO75400 RNU6-1074P-201ENST00000383995 104 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PRPF40AO75400 EIF4E2P1-201ENST00000393781 255 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC119751.6-201ENST00000416712 186 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 EIF4EP1-201ENST00000422311 642 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC112498.1-201ENST00000444401 332 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 RPS15AP27-201ENST00000449183 343 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC107399.1-201ENST00000451226 265 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF40AO75400 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40AO75400 RPS26P28-201ENST00000470806 348 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC068587.1-201ENST00000483613 781 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 TRBVA-201ENST00000498804 316 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 KLHL2P1-201ENST00000508691 521 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 BTF3P13-201ENST00000513224 490 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 GMPSP1-201ENST00000514075 579 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC008489.1-201ENST00000524271 483 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AP006587.4-201ENST00000526053 529 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AP005597.4-201ENST00000526762 229 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AP003072.1-201ENST00000531740 145 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40AO75400 OR11H5P-201ENST00000554039 926 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF40AO75400 BNIP3P5-201ENST00000562290 498 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40AO75400 FRG2DP-202ENST00000566967 323 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 MIR4700-201ENST00000578311 74 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.33□□□□□ -1.56
PRPF40AO75400 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC008638.3-201ENST00000603341 463 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC174048.1-201ENST00000603389 144 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AL031320.1-201ENST00000604177 357 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 RNA5SP108-201ENST00000605921 117 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AL365204.3-201ENST00000612448 685 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AL359547.2-201ENST00000615810 418 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC007546.1-201ENST00000619452 559 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 AC087385.3-201ENST00000620477 187 ntBASIC5.33□□□□□ -1.56
PRPF40AO75400 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.33□□□□□ -1.56
PRPF40AO75400 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms