Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.43□□□□□ -1.86
ZIC3O60481 CCNG2P1-201ENST00000549521 1000 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.43□□□□□ -1.86
ZIC3O60481 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.43□□□□□ -1.86
ZIC3O60481 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.43□□□□□ -1.86
ZIC3O60481 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 AL121772.2-201ENST00000614331 297 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 AC090517.2-201ENST00000614966 680 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 AL450472.3-201ENST00000615578 367 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.43□□□□□ -1.86
ZIC3O60481 AC015967.1-201ENST00000619893 476 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 AL136313.1-201ENST00000624804 202 ntBASIC3.43□□□□□ -1.86
ZIC3O60481 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZIC3O60481 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.43□□□□□ -1.86
ZIC3O60481 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZIC3O60481 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZIC3O60481 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
ZIC3O60481 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ZIC3O60481 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 AC008725.1-201ENST00000605123 2263 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.42□□□□□ -1.86
ZIC3O60481 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ZIC3O60481 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.42□□□□□ -1.86
ZIC3O60481 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 RNA5SP235-201ENST00000365411 114 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ZIC3O60481 RNU6-882P-201ENST00000391025 103 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 SOD2P1-201ENST00000396543 562 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 CALM2P3-201ENST00000400429 449 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 RNU4-65P-201ENST00000410473 140 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.42□□□□□ -1.86
ZIC3O60481 MTCO3P12-201ENST00000416718 547 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 ELOCP4-201ENST00000420090 333 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC069157.1-201ENST00000421749 137 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 MTCO2P19-201ENST00000427513 598 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC137499.1-201ENST00000427602 88 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC073464.1-201ENST00000429823 534 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 FCF1P1-201ENST00000432690 571 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC090774.1-201ENST00000435925 246 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC005094.1-201ENST00000440420 368 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC003071.1-201ENST00000451219 789 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 AC007182.2-201ENST00000489251 402 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 RPS15AP36-201ENST00000492022 382 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC078817.1-201ENST00000492623 435 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC010493.1-201ENST00000513479 292 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 RNU6-64P-201ENST00000517119 105 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 RNU1-45P-201ENST00000517191 141 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC090572.1-201ENST00000519251 160 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 HMGN1P28-201ENST00000521340 364 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC125611.2-201ENST00000551907 647 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 MIR5187-201ENST00000583479 76 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 MIR4293-201ENST00000584305 78 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC010928.3-201ENST00000587712 541 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 BNIP3P33-201ENST00000598912 569 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AL391646.1-201ENST00000603860 190 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AL137849.1-201ENST00000604767 169 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 AL136363.1-201ENST00000605349 337 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.42□□□□□ -1.86
ZIC3O60481 AC103858.2-201ENST00000621471 543 ntBASIC3.42□□□□□ -1.86
ZIC3O60481 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.42□□□□□ -1.86
ZIC3O60481 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.42□□□□□ -1.86
ZIC3O60481 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZIC3O60481 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.41□□□□□ -1.86
ZIC3O60481 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZIC3O60481 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 Y_RNA.1-201ENST00000352915 104 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RNU6-223P-201ENST00000362830 107 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RNU6-511P-201ENST00000363496 107 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 Y_RNA.159-201ENST00000363674 87 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RNU6-1074P-201ENST00000383995 104 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AL109755.1-201ENST00000401791 649 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RPS3AP24-201ENST00000407896 734 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RAB9AP3-201ENST00000412737 573 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 EI24P1-201ENST00000416584 867 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.41□□□□□ -1.86
ZIC3O60481 USP9YP18-201ENST00000425912 695 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.41□□□□□ -1.86
ZIC3O60481 AC079780.1-201ENST00000428259 207 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 TIMM9P3-201ENST00000428659 274 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC002486.1-201ENST00000435098 391 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms