Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC127070.3-201ENST00000503695 3263 ntBASIC5.22□□□□□ -1.57
RNF223E7ERA6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF223E7ERA6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF223E7ERA6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.21□□□□□ -1.57
RNF223E7ERA6 AC068700.1-201ENST00000565862 3754 ntBASIC5.21□□□□□ -1.57
RNF223E7ERA6 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNF223E7ERA6 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RNF223E7ERA6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
RNF223E7ERA6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RNF223E7ERA6 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNF223E7ERA6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 Y_RNA.24-201ENST00000362508 103 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 RNU5F-3P-201ENST00000363767 117 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 Y_RNA.572-201ENST00000384757 98 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 RN7SKP286-201ENST00000410894 299 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AL714022.1-201ENST00000439897 151 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 FRG2FP-204ENST00000453982 852 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 VPS25P1-201ENST00000455691 508 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC092798.1-201ENST00000458542 409 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC136628.3-201ENST00000521868 290 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AL513218.1-201ENST00000606527 391 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 RN7SL787P-201ENST00000613000 284 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC131238.1-201ENST00000617135 328 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC027309.3-201ENST00000623419 351 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AP002799.1-201ENST00000623552 423 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 CR381572.2-201ENST00000624852 397 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 AL596275.2-206ENST00000641957 626 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 ADAM24P-201ENST00000398655 2101 ntBASIC5.21□□□□□ -1.58
RNF223E7ERA6 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RNF223E7ERA6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF223E7ERA6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 MAPK10-344ENST00000641718 3746 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 RNU1-24P-201ENST00000364285 165 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 Y_RNA.584-201ENST00000391090 114 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 MIR541-201ENST00000401360 84 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AL078601.1-201ENST00000444542 271 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AL136038.1-201ENST00000497246 351 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC090958.1-201ENST00000511122 351 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF223E7ERA6 Y_RNA.710-201ENST00000516975 110 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC133485.4-201ENST00000561835 220 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC138907.4-201ENST00000570107 226 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF223E7ERA6 AC116447.1-201ENST00000613153 453 ntBASIC5.2□□□□□ -1.58
RNF223E7ERA6 U1.25-201ENST00000614085 162 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms