Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AP000873.5-201ENST00000533906 236 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 CCNG2P1-201ENST00000549521 1000 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC005476.1-201ENST00000554427 397 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 MED28P6-201ENST00000558776 231 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL157394.1-201ENST00000562983 1224 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC009977.1-201ENST00000586015 570 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 BNIP3P8-201ENST00000597863 560 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC064807.4-201ENST00000607201 407 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC103710.3-201ENST00000608157 948 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC024941.1-201ENST00000612250 334 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC004777.1-201ENST00000624317 287 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 AC010149.2-201ENST00000637608 315 ntBASIC3.64□□□□□ -1.83
LRRC53A6NM62 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC53A6NM62 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC53A6NM62 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
LRRC53A6NM62 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC53A6NM62 ZNF285B-201ENST00000561698 1767 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 Y_RNA.201-201ENST00000364052 96 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 RNU6-173P-201ENST00000364215 104 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 Y_RNA.318-201ENST00000365131 97 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC53A6NM62 RNU6-297P-201ENST00000384636 107 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 SNORA40.3-201ENST00000390964 122 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 RNU6-754P-201ENST00000391166 107 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 MTCO2P34-201ENST00000421994 607 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 MTATP6P4-201ENST00000427725 675 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AL353706.1-201ENST00000436728 494 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 RPL26P6-201ENST00000440913 438 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 RPL17P49-201ENST00000443728 411 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 PDSS1P2-201ENST00000449397 678 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 HMGB3P8-201ENST00000449709 577 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 SNRPGP3-201ENST00000469405 227 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AL049830.2-201ENST00000480072 201 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 RPL23AP41-201ENST00000484754 458 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC53A6NM62 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 SNORA31.8-201ENST00000516327 108 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 SNORA31.22-201ENST00000517204 135 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC103843.2-201ENST00000530523 682 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 COX6CP3-201ENST00000580869 223 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC005771.1-201ENST00000585581 349 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC007038.2-201ENST00000608095 740 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC004067.1-201ENST00000608733 700 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC010678.1-201ENST00000614118 713 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 AC019226.1-201ENST00000625666 515 ntBASIC3.63□□□□□ -1.83
LRRC53A6NM62 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRC53A6NM62 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC53A6NM62 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC53A6NM62 TEX21P-201ENST00000447107 1476 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 RNU6-432P-201ENST00000384196 109 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 SNORD17-201ENST00000390930 237 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 FCF1P10-201ENST00000407590 479 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 RNU2-71P-201ENST00000411395 189 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 RAB28P1-201ENST00000411517 641 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 CYCSP19-201ENST00000411715 316 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 HMGN1P24-201ENST00000412282 298 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC53A6NM62 RPL21P32-201ENST00000419877 477 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 PPP1R11P2-201ENST00000423543 382 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 BX890604.2-201ENST00000427883 474 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 AC091390.1-201ENST00000433904 331 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 HMGB1P12-201ENST00000438594 598 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 PGBD4P3-201ENST00000440731 581 ntBASIC3.62□□□□□ -1.83
LRRC53A6NM62 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC53A6NM62 SNRPFP4-201ENST00000456366 242 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms