Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
MRPS28Q9Y2Q9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
MRPS28Q9Y2Q9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
MRPS28Q9Y2Q9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
MRPS28Q9Y2Q9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 RNA5SP295-201ENST00000362655 121 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-1207P-201ENST00000384343 107 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 Y_RNA.554-201ENST00000384672 102 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AL136116.1-201ENST00000403591 381 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 PPIAP31-201ENST00000405422 495 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AL356967.1-201ENST00000406305 431 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 RNA5SP56-201ENST00000410277 118 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MTND1P21-201ENST00000412991 285 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MTND3P17-201ENST00000416968 344 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 C1DP2-201ENST00000418167 426 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 OR2B8P-201ENST00000432841 938 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 RPL21P133-201ENST00000443666 476 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 NUTF2P7-201ENST00000453086 375 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MTND1P3-201ENST00000484956 952 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC108078.1-201ENST00000508073 725 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-506P-201ENST00000516553 94 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC022616.6-201ENST00000520479 119 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 OR8R1P-201ENST00000543943 764 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC123904.2-201ENST00000548059 300 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MIR3160-1-201ENST00000577972 85 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MIR3118-1-201ENST00000581787 76 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AL020997.2-201ENST00000602607 184 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC004853.1-201ENST00000604902 698 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AL592295.2-201ENST00000612578 206 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 MIR8058-201ENST00000615737 89 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AC079597.1-201ENST00000624306 508 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 PISRT1-201ENST00000626175 531 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 AP000553.6-201ENST00000641242 118 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 FARSBP1-201ENST00000435808 1778 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.15□□□□□ -1.91
MRPS28Q9Y2Q9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC093536.2-201ENST00000565257 1406 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 RNU5A-6P-201ENST00000384136 116 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 SNORD51-201ENST00000384320 80 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 MIR184-201ENST00000384962 84 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 SNORA57.1-201ENST00000391227 145 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AL356421.1-201ENST00000403255 413 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 RNU6-195P-201ENST00000411352 109 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AL359704.1-201ENST00000411586 781 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC006548.1-201ENST00000427470 102 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AL158071.1-201ENST00000430315 461 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 MTND3P21-201ENST00000433774 331 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 VDAC1P3-201ENST00000434069 851 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 RBMX2P4-201ENST00000441256 376 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC010655.1-201ENST00000449336 292 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 FGF7P6-202ENST00000451282 293 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 HMGB1P15-201ENST00000453854 435 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 HMGN2P16-201ENST00000456802 261 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 SNORD121B-201ENST00000458838 81 ntBASIC3.14□□□□□ -1.91
MRPS28Q9Y2Q9 AC004801.2-202ENST00000463559 283 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms