Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC087883.1-201ENST00000551882 391 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 AL845331.3-202ENST00000562856 261 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 SNRPGP15-201ENST00000600149 222 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 XIAPP1-201ENST00000603162 600 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC008638.3-201ENST00000603341 463 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 MIR98-201ENST00000606724 119 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AL391813.2-201ENST00000609113 322 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC012314.7-201ENST00000619693 93 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AL357559.1-201ENST00000622228 274 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 U6.105-201ENST00000637379 88 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL645937.1-201ENST00000641739 1652 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 DDX10P1-201ENST00000448545 1933 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL20A1Q9P218 RNA5SP387-201ENST00000364226 106 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 SNORA20.2-201ENST00000383922 131 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 MIR135A2-201ENST00000384854 100 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 RNU4-65P-201ENST00000410473 140 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 CRYBB2P1-203ENST00000415709 538 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC004552.1-201ENST00000419089 348 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 RPL31P35-201ENST00000431058 377 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL358934.1-201ENST00000432346 324 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 MTATP6P13-201ENST00000438531 667 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 PSPHP1-201ENST00000450062 261 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC007967.1-201ENST00000455422 1159 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 C1DP4-201ENST00000455429 424 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 RPS26P3-201ENST00000470205 348 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 S100A11P1-201ENST00000477525 312 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 RN7SL293P-201ENST00000481765 281 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC090543.2-201ENST00000483963 348 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC004057.1-201ENST00000485827 348 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 RPS3AP50-201ENST00000487064 803 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 RN7SKP244-201ENST00000516513 307 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC011979.2-201ENST00000527568 352 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 OR5B10P-201ENST00000532869 642 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL133153.1-201ENST00000557756 303 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 MTATP6P3-201ENST00000581686 676 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 AP000860.1-201ENST00000605250 559 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL391261.4-201ENST00000616012 481 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 AL158209.2-201ENST00000619266 216 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 AC019226.1-201ENST00000625666 515 ntBASIC4.19□□□□□ -1.74
COL20A1Q9P218 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL20A1Q9P218 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL20A1Q9P218 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.19□□□□□ -1.74
COL20A1Q9P218 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 SNORD74.4-201ENST00000364129 80 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 SNORD46.1-201ENST00000364139 104 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 RNA5SP235-201ENST00000365411 114 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 RNY3P13-201ENST00000365542 102 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 RNU6-1181P-201ENST00000384191 106 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 MIR490-201ENST00000384865 128 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 MIR181A1-201ENST00000385026 110 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 HLFP1-201ENST00000402375 499 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 RNU2-43P-201ENST00000410306 190 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 DBIP2-201ENST00000419076 262 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 ELOCP4-201ENST00000420090 333 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 TIMM9P3-201ENST00000428659 274 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 NDUFB1P1-201ENST00000435191 180 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC079448.1-201ENST00000449377 373 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC135721.1-201ENST00000497954 479 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms