Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4□□□□□ -1.77
VSX1Q9NZR4 SNORA62.1-201ENST00000364287 154 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 Y_RNA.431-201ENST00000384086 102 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 RNU6-903P-201ENST00000391270 109 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 RNA5SP397-201ENST00000391323 118 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AL356967.1-201ENST00000406305 431 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 MIR1183-201ENST00000408856 89 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 MTND3P8-201ENST00000412909 339 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4□□□□□ -1.77
VSX1Q9NZR4 AC068533.1-201ENST00000418542 415 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4□□□□□ -1.77
VSX1Q9NZR4 MTCYBP8-201ENST00000422855 651 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4□□□□□ -1.77
VSX1Q9NZR4 DUTP6-201ENST00000425573 462 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 CKS1BP5-201ENST00000434172 273 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 IFNA20P-201ENST00000436840 528 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AL162389.1-201ENST00000449233 177 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AC012671.1-201ENST00000451912 203 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 SNRPFP3-201ENST00000457792 225 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 HMGN2P26-201ENST00000463169 339 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 RNU4-60P-201ENST00000517239 135 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4□□□□□ -1.77
VSX1Q9NZR4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4□□□□□ -1.77
VSX1Q9NZR4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4□□□□□ -1.77
VSX1Q9NZR4 AC078814.3-201ENST00000553036 491 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 RPL23AP97-201ENST00000568955 471 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 MIR4703-201ENST00000577728 79 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 SNORD84-203ENST00000584275 78 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4□□□□□ -1.77
VSX1Q9NZR4 AC007687.1-201ENST00000602704 304 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 RNU6-89P-201ENST00000606519 100 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 FAM25E-202ENST00000608562 189 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AC009248.2-201ENST00000619826 254 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AC091953.3-201ENST00000623220 236 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AL136313.1-201ENST00000624804 202 ntBASIC4□□□□□ -1.77
VSX1Q9NZR4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4□□□□□ -1.77
VSX1Q9NZR4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4□□□□□ -1.77
VSX1Q9NZR4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4□□□□□ -1.77
VSX1Q9NZR4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4□□□□□ -1.77
VSX1Q9NZR4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4□□□□□ -1.77
VSX1Q9NZR4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RNU6-552P-201ENST00000362869 119 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 MIR550A3-201ENST00000390735 95 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL356432.1-201ENST00000405809 419 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL606923.1-201ENST00000406616 190 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RNU2-36P-201ENST00000410361 191 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC092447.6-201ENST00000414578 210 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 UBE2FP1-201ENST00000416536 447 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 PDCL2P1-201ENST00000419302 352 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RAC1P6-201ENST00000423911 575 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 SAR1AP4-201ENST00000429225 591 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL049745.1-201ENST00000433953 286 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL138799.3-201ENST00000438968 350 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RPL23AP93-201ENST00000440847 484 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 MTCO3P45-201ENST00000443036 613 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC106872.2-201ENST00000494303 480 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RNU6-1314P-201ENST00000517139 104 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AP005435.4-201ENST00000529514 284 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC093012.1-202ENST00000549403 582 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RN7SL690P-201ENST00000582087 240 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AP001029.3-201ENST00000588063 596 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC243960.4-201ENST00000600532 288 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL034351.1-201ENST00000605288 668 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AL132765.2-201ENST00000610812 351 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC090574.1-201ENST00000623186 233 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC007546.2-201ENST00000623996 360 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AC112487.2-201ENST00000637950 304 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 MTND4P35-201ENST00000604257 1375 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.99□□□□□ -1.77
VSX1Q9NZR4 NOL8P1-201ENST00000508336 3529 ntBASIC3.99□□□□□ -1.77
VSX1Q9NZR4 TAB3P1-202ENST00000452645 1634 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms