Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.9□□□□□ -1.62
PDLIM7Q9NR12 Y_RNA.144-201ENST00000363521 113 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 SNORA62.1-201ENST00000364287 154 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 SNORA33.2-201ENST00000365413 134 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 SNORD82-201ENST00000365530 70 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AL359643.1-201ENST00000404109 423 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 MIR1271-201ENST00000408537 86 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 RNU2-62P-201ENST00000410868 191 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 Z82205.1-201ENST00000428456 297 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC007389.2-201ENST00000434630 306 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 RPL23AP83-201ENST00000434984 473 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 RPS4XP10-201ENST00000465034 731 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC090096.1-201ENST00000489168 390 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 FAM206BP-201ENST00000510179 541 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC005741.1-201ENST00000511094 432 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 FTH1P21-201ENST00000512179 511 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.718-201ENST00000517110 102 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 RN7SKP234-201ENST00000517173 224 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AP005435.4-201ENST00000529514 284 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 MIR3944-201ENST00000581277 108 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC053481.4-201ENST00000583164 216 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 MIR3936-201ENST00000584304 110 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC006116.10-201ENST00000591836 581 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC080078.3-201ENST00000605407 463 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AL627309.6-201ENST00000606857 840 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC005086.4-201ENST00000623065 213 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC091905.2-201ENST00000623143 306 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AL672167.1-203ENST00000641299 2975 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 AP001273.1-201ENST00000624493 3152 ntBASIC4.9□□□□□ -1.63
PDLIM7Q9NR12 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.301-201ENST00000364990 103 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 SNORD116-29-201ENST00000384516 83 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 MIR19A-201ENST00000384878 82 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 RNU6-903P-201ENST00000391270 109 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AL606923.1-201ENST00000406616 190 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 RN7SKP167-201ENST00000411047 285 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 SNORA74C-2-201ENST00000411179 201 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 RPS29P7-201ENST00000439662 171 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 RPL21P103-201ENST00000479921 488 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC092436.1-201ENST00000506450 503 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.711-201ENST00000516993 102 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 SNORA25.17-201ENST00000517184 124 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC011979.2-201ENST00000527568 352 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC008737.2-201ENST00000599446 118 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC113194.1-201ENST00000606037 500 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AL031666.3-201ENST00000609320 1006 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC010205.1-201ENST00000616668 449 ntBASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PDLIM7Q9NR12 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 RNA5SP307-201ENST00000362863 116 ntBASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 RNU6-552P-201ENST00000362869 119 ntBASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.145-201ENST00000363527 102 ntBASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 RNU6-522P-201ENST00000364497 107 ntBASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 SNORA70E-201ENST00000384492 135 ntBASIC4.88□□□□□ -1.63
PDLIM7Q9NR12 SNORD96B-201ENST00000386148 79 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms