Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC090616.5-202ENST00000582111 297 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC119751.7-201ENST00000600494 245 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AL031985.2-201ENST00000600955 480 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC092354.2-201ENST00000607786 514 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 AL590099.1-201ENST00000615276 138 ntBASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD1Q9GZZ0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 Y_RNA.77-201ENST00000362962 107 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 RNU6-97P-201ENST00000363387 104 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 RNU6-809P-201ENST00000384461 107 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 ATP5JP1-201ENST00000431631 322 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 HMGN2P20-201ENST00000437531 273 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 Z82190.1-201ENST00000454534 490 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 SNRPGP9-201ENST00000456025 225 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 MTCO1P42-201ENST00000457379 726 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC116337.2-201ENST00000477662 156 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 SAP18P1-201ENST00000512058 390 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC017037.2-201ENST00000513850 890 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 Y_RNA.695-201ENST00000516715 107 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC007115.1-201ENST00000546853 234 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC005951.1-201ENST00000576706 485 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 SNRPGP15-201ENST00000600149 222 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC012065.4-201ENST00000602445 679 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC112187.2-201ENST00000604345 283 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC128687.1-201ENST00000605304 619 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 U3.45-201ENST00000607547 219 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC091965.4-201ENST00000607691 587 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC012360.2-201ENST00000609349 391 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC093591.3-201ENST00000634516 308 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 CRYM-AS1-204ENST00000637983 556 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AC244517.1-201ENST00000606030 2086 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 AL356274.2-201ENST00000624379 3752 ntBASIC3.14□□□□□ -1.91
HOXD1Q9GZZ0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 MIR134-201ENST00000385258 73 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 Z99755.1-201ENST00000414048 380 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 THAP5P1-201ENST00000439089 262 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 FAM103A2P-201ENST00000444122 354 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AL360221.1-201ENST00000445989 335 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 PDSS1P2-201ENST00000449397 678 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 RPL21P8-201ENST00000465083 535 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 ST13P14-201ENST00000474095 734 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AP000797.1-201ENST00000478870 387 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC093278.1-201ENST00000494700 600 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC078918.1-201ENST00000498515 228 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 MTND4LP18-201ENST00000526864 291 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CR383656.7-201ENST00000548164 174 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 AC034105.4-201ENST00000568304 277 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 NBR2-204ENST00000587322 63 ntBASIC3.13□□□□□ -1.91
HOXD1Q9GZZ0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms