Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 RNU6-116P-201ENST00000384042 109 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 LAP3P1-201ENST00000403648 294 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 RNU4-26P-201ENST00000410270 107 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AL513331.1-201ENST00000411908 397 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 FTH1P2-201ENST00000466086 412 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 RPL23AP65-201ENST00000475608 468 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 S100A11P1-201ENST00000477525 312 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 MTCO3P9-201ENST00000506989 781 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 RNU6-709P-201ENST00000517257 104 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC107953.1-201ENST00000522216 297 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AL118558.2-201ENST00000556294 238 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 MIR4270-201ENST00000581799 70 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AL161616.1-201ENST00000611867 286 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AL359547.2-201ENST00000615810 418 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC009248.2-201ENST00000619826 254 ntBASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM55Q9BYV6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 RNU6-288P-201ENST00000363690 104 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 RNU6-522P-201ENST00000364497 107 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 SNORA32.2-201ENST00000384049 122 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 RNU6-398P-201ENST00000384143 109 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MIR607-201ENST00000385241 96 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MIR921-201ENST00000401133 56 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AL592114.1-201ENST00000403842 483 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 PDCL2P1-201ENST00000419302 352 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AL645937.1-202ENST00000421799 937 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 RPL35AP12-201ENST00000425362 338 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 RPL21P66-201ENST00000426566 466 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 TXNP1-201ENST00000441872 371 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC093019.1-201ENST00000443135 252 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC112498.1-201ENST00000444401 332 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 KNOP1P3-201ENST00000446933 426 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AL590639.1-201ENST00000456484 337 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 RNU6-953P-201ENST00000459154 107 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC007547.1-201ENST00000462177 490 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 SNORA31.8-201ENST00000516327 108 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MYL12AP1-201ENST00000518490 515 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MIR4737-201ENST00000583979 81 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC234771.5-201ENST00000600161 514 ntBASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM55Q9BYV6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 TLK1P1-201ENST00000456760 2440 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 Y_RNA.142-201ENST00000363491 102 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 Y_RNA.166-201ENST00000363730 102 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 CISD1P1-201ENST00000393907 327 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 MTCO3P46-201ENST00000425787 232 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 HMGB1P27-201ENST00000431429 603 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 AL451139.1-201ENST00000434718 346 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 PRDX3P3-201ENST00000447765 522 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 AP000926.1-201ENST00000479573 241 ntBASIC4.76□□□□□ -1.65
TRIM55Q9BYV6 RN7SL244P-201ENST00000493405 297 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms