Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 Z95327.2-201ENST00000414579 1873 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 XIAPP3-201ENST00000312918 795 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.461-201ENST00000384263 103 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 SNORD70.1-201ENST00000391007 85 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RNU6-293P-201ENST00000411259 106 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RPLP0P7-201ENST00000416050 667 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AF186996.5-201ENST00000418098 904 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RPL23AP38-201ENST00000423801 469 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AL590632.1-201ENST00000424289 371 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AL031736.2-201ENST00000426573 787 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 HMGB1P9-201ENST00000429856 646 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RPL35AP22-201ENST00000436855 335 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 OR1H1P-201ENST00000448731 937 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AL353691.1-201ENST00000451332 387 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AP000942.1-201ENST00000463969 747 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 DEFB109F-201ENST00000491870 277 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC026801.1-201ENST00000497178 464 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC009901.1-201ENST00000506703 541 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RNU4-77P-201ENST00000516692 156 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC018442.3-201ENST00000523025 183 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC012339.2-201ENST00000523996 453 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC021006.3-201ENST00000530771 192 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AP000889.1-201ENST00000530968 660 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC027369.5-201ENST00000533838 755 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC040958.1-201ENST00000561102 201 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RN7SL802P-201ENST00000577858 299 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AL138889.2-201ENST00000603883 242 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 Z98751.3-201ENST00000604447 521 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC098479.1-201ENST00000609225 154 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC009570.1-201ENST00000609599 745 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC100827.5-201ENST00000615883 426 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC099654.2-201ENST00000433031 1980 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 AC100778.3-201ENST00000580060 1750 ntBASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SSBP3Q9BWW4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 IRF5P1-201ENST00000504852 2164 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 LINC01355-201ENST00000566551 5444 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 AC010615.1-201ENST00000594254 1764 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 SNORD62.1-201ENST00000362541 86 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 SNORA20.1-201ENST00000364790 130 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1293P-201ENST00000384077 107 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RNU6-432P-201ENST00000384196 109 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RNU6-33P-201ENST00000384793 107 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 MIR1252-201ENST00000408861 65 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 AC069213.2-201ENST00000420238 366 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RPS15AP10-201ENST00000432472 382 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 RPL21P112-201ENST00000434403 463 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 CYCSP24-201ENST00000445119 316 ntBASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.13□□□□□ -1.75
SSBP3Q9BWW4 AC005008.1-201ENST00000456151 612 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms