Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SL369P-201ENST00000477138 299 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 FTH1P11-201ENST00000517577 551 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 RNA5SP439-201ENST00000617595 124 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 SCARNA4-201ENST00000629045 128 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 IGHVIII-44-202ENST00000636235 289 ntBASIC5.57□□□□□ -1.52
USB1Q9BQ65 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.57□□□□□ -1.52
USB1Q9BQ65 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USB1Q9BQ65 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 PARP4P2-201ENST00000446672 3326 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC009812.4-201ENST00000569134 1805 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 SNORD35A-201ENST00000363389 86 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 RNU6-215P-201ENST00000365169 102 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 Y_RNA.446-201ENST00000384178 104 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC094019.1-201ENST00000434678 472 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC008267.6-201ENST00000441664 139 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 UQCRBP2-201ENST00000447827 297 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC090958.1-201ENST00000511122 351 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 RNA5SP441-201ENST00000516809 88 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AL645944.1-201ENST00000603857 493 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 MIR7159-201ENST00000620587 66 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
USB1Q9BQ65 AL591135.1-201ENST00000401578 5914 ntBASIC5.56□□□□□ -1.52
USB1Q9BQ65 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
USB1Q9BQ65 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC004656.1-201ENST00000568479 4951 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 RNU6-336P-201ENST00000364891 107 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 OOSP1P1-201ENST00000423265 274 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 GAPDHP59-201ENST00000435908 267 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AL590399.6-201ENST00000446396 307 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AL359073.1-201ENST00000448036 403 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC002553.3-201ENST00000453002 341 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 RN7SL72P-201ENST00000460697 269 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC005532.2-201ENST00000467154 373 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC117440.1-201ENST00000474107 571 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 RPL23AP75-201ENST00000491601 451 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 ZNF519P4-201ENST00000514008 125 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 MIR4502-201ENST00000580432 81 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms