Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC234781.5-201ENST00000508429 271 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 XKRY-201ENST00000510392 1100 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC010625.1-201ENST00000511296 403 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
VAT1Q99536 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.4□□□□□ -2.03
VAT1Q99536 SNORA48.10-201ENST00000516965 160 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.4□□□□□ -2.03
VAT1Q99536 AC087272.1-201ENST00000523624 533 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.4□□□□□ -2.03
VAT1Q99536 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.4□□□□□ -2.03
VAT1Q99536 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
VAT1Q99536 ZNF971P-201ENST00000562068 1249 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.4□□□□□ -2.03
VAT1Q99536 AC026741.1-201ENST00000605892 482 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC097504.2-201ENST00000608088 454 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AP000254.1-201ENST00000609934 520 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC104237.2-201ENST00000612456 443 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AC099654.7-201ENST00000635788 2127 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 AL163152.1-201ENST00000642001 374 ntBASIC2.4□□□□□ -2.03
VAT1Q99536 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
VAT1Q99536 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 MIR135A2-201ENST00000384854 100 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 RNU6-1197P-201ENST00000391183 107 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 ANAPC10P1-201ENST00000395991 556 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
VAT1Q99536 AC024082.2-201ENST00000434771 238 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 COX6CP18-201ENST00000448769 222 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 PNPLA4P1-201ENST00000458328 305 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC013828.1-201ENST00000481845 158 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
VAT1Q99536 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.39□□□□□ -2.03
VAT1Q99536 OR4R2P-201ENST00000530815 597 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.39□□□□□ -2.03
VAT1Q99536 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.39□□□□□ -2.03
VAT1Q99536 AC234778.2-201ENST00000566241 354 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.39□□□□□ -2.03
VAT1Q99536 AC015688.2-201ENST00000584523 262 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC013444.2-201ENST00000603317 787 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC024560.3-201ENST00000608482 349 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC092954.1-201ENST00000609121 445 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 VN1R74P-201ENST00000613259 503 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AL354696.1-201ENST00000614652 497 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC009159.1-201ENST00000618386 642 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.39□□□□□ -2.03
VAT1Q99536 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
VAT1Q99536 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VAT1Q99536 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
VAT1Q99536 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
VAT1Q99536 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 NACA3P-201ENST00000359690 648 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 RNU6-878P-201ENST00000384578 110 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 AL035405.1-201ENST00000400795 710 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 RNU2-28P-201ENST00000410457 189 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.38□□□□□ -2.03
VAT1Q99536 MTCO3P1-205ENST00000422088 832 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.38□□□□□ -2.03
VAT1Q99536 AC234781.2-201ENST00000426370 994 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 MTATP6P11-201ENST00000428071 670 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AC008379.1-201ENST00000463655 464 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AC104164.3-201ENST00000467363 1258 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.38□□□□□ -2.03
VAT1Q99536 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.38□□□□□ -2.03
VAT1Q99536 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.38□□□□□ -2.03
VAT1Q99536 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 CR383656.7-201ENST00000548164 174 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VAT1Q99536 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.38□□□□□ -2.03
VAT1Q99536 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.38□□□□□ -2.03
VAT1Q99536 MIR4666A-201ENST00000580160 79 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AL390838.2-201ENST00000602394 274 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 RPL23AP92-201ENST00000603609 255 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 RPAP2P1-201ENST00000603626 1168 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AP003973.1-201ENST00000604639 691 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 AC008568.2-201ENST00000623862 2313 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 OR4G11P-202ENST00000642116 1414 ntBASIC2.38□□□□□ -2.03
VAT1Q99536 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
VAT1Q99536 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.38□□□□□ -2.03
VAT1Q99536 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAT1Q99536 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAT1Q99536 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAT1Q99536 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VAT1Q99536 AC010680.1-201ENST00000590024 3590 ntBASIC2.37□□□□□ -2.03
VAT1Q99536 DEFB108F-201ENST00000344638 222 ntBASIC2.37□□□□□ -2.03
VAT1Q99536 U3.12-201ENST00000364498 214 ntBASIC2.37□□□□□ -2.03
VAT1Q99536 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
VAT1Q99536 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VAT1Q99536 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VAT1Q99536 AL122016.1-201ENST00000403365 367 ntBASIC2.37□□□□□ -2.03
VAT1Q99536 AL513477.1-202ENST00000417061 214 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms