Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AL356968.1-201ENST00000416622 474 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 SUMO1P2-201ENST00000452524 304 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC010326.1-201ENST00000462726 602 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 RPS20P21-201ENST00000466859 343 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 RBBP4P6-201ENST00000508098 202 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC107222.1-201ENST00000510899 637 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 TBCAP3-201ENST00000512475 312 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 RNU6-27P-201ENST00000516146 107 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 RNY3P15-201ENST00000516297 97 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC133555.2-201ENST00000550213 292 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC026470.2-201ENST00000561492 181 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AL670379.4-201ENST00000605279 254 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC116447.1-201ENST00000613153 453 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 SNHG22-203ENST00000617833 660 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC091925.2-201ENST00000625059 256 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC009229.4-201ENST00000623854 1947 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC090971.4-201ENST00000560291 1800 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 MIR133A2-201ENST00000347538 102 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.307-201ENST00000365022 117 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.380-201ENST00000365663 111 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RNU6-946P-201ENST00000383878 107 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RNU2-3P-201ENST00000410144 191 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RNU6-293P-201ENST00000411259 106 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RPL21P24-201ENST00000413752 448 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 DNAJC19P7-201ENST00000428811 344 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC068287.1-201ENST00000430283 295 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 HIGD1AP11-201ENST00000438361 280 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 CEACAMP4-201ENST00000457676 421 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC103987.1-201ENST00000473394 348 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RN7SL481P-201ENST00000477764 299 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 DEFB109F-201ENST00000491870 277 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RPL22P13-201ENST00000493291 347 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC016065.2-201ENST00000514530 444 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 DYNLL1P4-201ENST00000549314 266 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC022726.1-201ENST00000587475 207 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AL355297.3-201ENST00000604082 446 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC107871.2-201ENST00000612894 502 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC243312.2-201ENST00000623340 601 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC85AQ96PX6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 IQCB2P-201ENST00000401788 1633 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 AL451142.2-201ENST00000429076 2090 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 SNORA73.1-201ENST00000363107 205 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.552-201ENST00000384665 112 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 SNORA16.2-201ENST00000390991 127 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 MIR298-201ENST00000401212 88 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 RNU6-603P-201ENST00000411403 107 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 Z99755.1-201ENST00000414048 380 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 C4BPAP2-201ENST00000428434 478 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 RPS20P1-201ENST00000434853 354 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 HMGB3P30-201ENST00000457863 606 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 SNORD5.1-201ENST00000458800 75 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 AC104472.2-201ENST00000469035 601 ntBASIC6.04□□□□□ -1.44
CCDC85AQ96PX6 AC022493.2-201ENST00000506122 481 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms