Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.49□□□□□ -1.53
HPS1Q92902 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS1Q92902 AC009127.3-201ENST00000570531 403 ntBASIC5.49□□□□□ -1.53
HPS1Q92902 MIR4423-201ENST00000580922 80 ntBASIC5.49□□□□□ -1.53
HPS1Q92902 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.49□□□□□ -1.53
HPS1Q92902 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.49□□□□□ -1.53
HPS1Q92902 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 MIR6861-201ENST00000618657 64 ntBASIC5.49□□□□□ -1.53
HPS1Q92902 MIR6811-201ENST00000620409 58 ntBASIC5.49□□□□□ -1.53
HPS1Q92902 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HPS1Q92902 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HPS1Q92902 AC027228.2-201ENST00000567141 2154 ntBASIC5.49□□□□□ -1.53
HPS1Q92902 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HPS1Q92902 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HPS1Q92902 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HPS1Q92902 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.48□□□□□ -1.53
HPS1Q92902 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
HPS1Q92902 AC116158.1-201ENST00000560231 2129 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 RNU6-653P-201ENST00000363074 106 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 RNA5SP391-201ENST00000363456 119 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 Y_RNA.309-201ENST00000365046 111 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 SNRPEP6-201ENST00000407465 277 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 RPL21P40-201ENST00000428586 483 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 AC092967.1-201ENST00000449016 481 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 RPS27AP3-201ENST00000453803 454 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 AL133244.1-201ENST00000456007 258 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 RNU6-1218P-201ENST00000458990 108 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 RNU6-914P-201ENST00000516749 109 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 RNU6-612P-201ENST00000516909 102 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 RPL23AP87-202ENST00000573039 466 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 OR1E3-201ENST00000575608 948 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 MIR4660-201ENST00000583549 74 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 AL034351.1-201ENST00000605288 668 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 MIR6721-201ENST00000617181 87 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.48□□□□□ -1.53
HPS1Q92902 MRPL57P1-201ENST00000621486 265 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 MIR1910-201ENST00000636955 80 ntBASIC5.48□□□□□ -1.53
HPS1Q92902 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HPS1Q92902 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.48□□□□□ -1.53
HPS1Q92902 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
HPS1Q92902 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS1Q92902 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HPS1Q92902 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.47□□□□□ -1.53
HPS1Q92902 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HPS1Q92902 AC100778.3-201ENST00000580060 1750 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS1Q92902 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
HPS1Q92902 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HPS1Q92902 SNORD16-201ENST00000362803 99 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS1Q92902 Y_RNA.563-201ENST00000384707 108 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AL031736.2-201ENST00000426573 787 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 USP9YP7-201ENST00000436723 430 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 SEPT7P4-201ENST00000437076 306 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 HIGD1AP2-201ENST00000446367 280 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AC073587.1-201ENST00000447093 876 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.47□□□□□ -1.53
HPS1Q92902 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS1Q92902 USP9YP32-201ENST00000452432 430 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS1Q92902 RN7SL254P-201ENST00000460609 284 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 RPL23AP2-201ENST00000471227 466 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HPS1Q92902 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS1Q92902 AC108043.1-201ENST00000512696 574 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 RN7SKP258-201ENST00000517151 304 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS1Q92902 CR383656.7-201ENST00000548164 174 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HPS1Q92902 RPL21P9-201ENST00000556149 474 ntBASIC5.47□□□□□ -1.53
HPS1Q92902 AC023043.4-201ENST00000612081 449 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms