Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 MAPK10-349ENST00000641767 3661 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC074029.4-201ENST00000624796 1859 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 NXPH1-205ENST00000602349 1953 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 OR56A5-201ENST00000340110 738 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-187P-201ENST00000384139 106 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-550P-201ENST00000391057 101 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AL136372.1-201ENST00000403060 228 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AL445189.1-201ENST00000405722 338 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-55P-201ENST00000411092 107 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 Z99755.1-201ENST00000414048 380 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AL139095.3-201ENST00000419672 1203 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 RBMY1KP-201ENST00000423480 476 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 C4BPAP2-201ENST00000428434 478 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 DYNLL1P5-201ENST00000467158 270 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 RPL7P5-201ENST00000471472 736 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 SCARNA22-201ENST00000503991 125 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 RN7SKP92-201ENST00000517266 244 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 SETP7-201ENST00000552169 453 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AC090115.3-201ENST00000553218 849 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 MIR4697-201ENST00000582977 78 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 MIR5096-201ENST00000583713 70 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AL731566.2-201ENST00000618971 317 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AC104260.2-201ENST00000623551 3497 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 AC005261.2-201ENST00000593427 4258 ntBASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHKBP1Q8TBC3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 STX3-208ENST00000641815 3236 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AL590240.1-201ENST00000334118 313 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.26-201ENST00000362539 101 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.126-201ENST00000363382 111 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.462-201ENST00000384268 102 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-225P-201ENST00000384613 103 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 SNORA41-201ENST00000384675 132 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DSTNP4-201ENST00000399472 474 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC110754.1-201ENST00000399740 601 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC114755.2-201ENST00000413520 361 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 ELOCP20-201ENST00000422460 345 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AL606753.1-201ENST00000427435 87 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC022022.1-201ENST00000430304 178 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC116533.1-201ENST00000459748 321 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AP001992.1-205ENST00000462248 379 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DEFB109F-201ENST00000491870 277 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AP002812.1-201ENST00000495378 474 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 HMGB1P35-201ENST00000503360 598 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC022447.4-201ENST00000504053 364 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-1069P-201ENST00000516612 133 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 SDR42E1P2-201ENST00000614861 481 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AL022401.1-201ENST00000619498 108 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 SDR42E1P4-201ENST00000620894 481 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 U6.104-201ENST00000637979 90 ntBASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.09□□□□□ -1.59
SHKBP1Q8TBC3 MTND5P6-201ENST00000422338 1798 ntBASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms