Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC018462.2-201ENST00000605375 395 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 ATP5A1P2-202ENST00000616464 443 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 PISRT1.1-201ENST00000616930 107 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 AC074029.4-201ENST00000624796 1859 ntBASIC4.57□□□□□ -1.68
NUP43Q8NFH3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP43Q8NFH3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.80-201ENST00000362996 102 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC019155.1-201ENST00000382242 574 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RNU6-128P-201ENST00000383976 107 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 SNORD3H-201ENST00000384486 214 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RNU6-178P-201ENST00000384631 104 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 SNORA68.2-201ENST00000391263 128 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AL583834.1-201ENST00000406943 343 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.594-201ENST00000410373 140 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RNU6-1050P-201ENST00000410388 107 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 EIF4HP2-201ENST00000424380 563 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 USP9YP16-201ENST00000430287 407 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AL162389.1-201ENST00000449233 177 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 USP9YP23-201ENST00000455085 407 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC010683.1-201ENST00000473673 378 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC015911.1-201ENST00000495111 156 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 MRPS33P2-201ENST00000507850 322 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RNU2-69P-201ENST00000516061 100 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RNU6-264P-201ENST00000517134 104 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RNU6-709P-201ENST00000517257 104 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 HMGN1P28-201ENST00000521340 364 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AP002404.1-201ENST00000532005 451 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 MIR4472-2-201ENST00000582069 67 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AL670379.4-201ENST00000605279 254 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 AC107027.3-201ENST00000565095 3473 ntBASIC4.56□□□□□ -1.68
NUP43Q8NFH3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP43Q8NFH3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL137003.2-201ENST00000606924 2538 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 OR9K1P-202ENST00000641111 3217 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC099654.2-201ENST00000433031 1980 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RNA5SP305-201ENST00000362665 119 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RNU6-393P-201ENST00000384475 107 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 MIR550A3-201ENST00000390735 95 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 Y_RNA.645-201ENST00000391229 102 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RN7SKP213-201ENST00000410746 298 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC008267.5-201ENST00000424928 265 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 FAR2P4-202ENST00000425399 584 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL669831.1-202ENST00000428504 417 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 HIGD1AP11-201ENST00000438361 280 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RPL12P3-201ENST00000440080 396 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RPL23AP33-201ENST00000442301 452 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 MTCO3P45-201ENST00000443036 613 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC087884.1-201ENST00000469738 328 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC010631.1-201ENST00000474150 156 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RPSAP50-201ENST00000481955 852 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AP001086.1-201ENST00000494882 321 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC023424.1-201ENST00000496058 459 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RNU6-1271P-201ENST00000517049 105 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 RNU6-699P-201ENST00000517081 110 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 AC107918.3-201ENST00000533272 382 ntBASIC4.55□□□□□ -1.68
NUP43Q8NFH3 OR8R1P-201ENST00000543943 764 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms