Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC117440.1-201ENST00000474107 571 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 RPS26P21-201ENST00000475397 348 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC104563.1-201ENST00000476147 376 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MTCYBP35-201ENST00000503630 1137 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 HSPE1P23-201ENST00000509838 286 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC017037.2-201ENST00000513850 890 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MTCO2P32-201ENST00000514865 403 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 RNA5SP385-201ENST00000515947 110 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 RN7SKP272-201ENST00000516988 232 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC009812.2-201ENST00000517657 457 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 ELOCP32-201ENST00000548625 324 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC009094.1-201ENST00000564443 426 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 OR4K8P-201ENST00000578842 1048 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AP001330.4-201ENST00000604350 154 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AL355810.1-201ENST00000614629 552 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AL356596.1-201ENST00000624230 379 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AP000526.1-201ENST00000603308 1388 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 ZNF833P-201ENST00000424938 1494 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 AC004972.1-201ENST00000623934 2209 ntBASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.81□□□□□ -1.96
C9orf40Q8IXQ3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AL391994.1-201ENST00000254724 282 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RPL21P132-201ENST00000331267 462 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-50P-201ENST00000362356 103 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 U3.6-201ENST00000363622 211 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 MIR135A2-201ENST00000384854 100 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 SNORA48.2-201ENST00000390926 124 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 MIR320C1-201ENST00000408566 88 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 SSXP9-201ENST00000417503 292 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 MTCO1P39-201ENST00000426148 480 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RPL23AP31-201ENST00000456160 467 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 HMGN2P16-201ENST00000456802 261 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 ARPC3P2-201ENST00000457786 533 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC068724.1-201ENST00000487100 792 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 HMGB1P36-201ENST00000487709 576 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RNA5SP468-201ENST00000516782 93 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-714P-201ENST00000516963 103 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AP002404.1-201ENST00000532005 451 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 ZNF321P-202ENST00000550843 495 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC090888.2-201ENST00000559765 1144 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AL022099.1-201ENST00000604551 712 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC024560.3-201ENST00000608482 349 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC090425.2-201ENST00000608818 501 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC009039.2-201ENST00000624524 529 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC017037.3-201ENST00000625016 472 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.8□□□□□ -1.96
C9orf40Q8IXQ3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 MTND5P19-201ENST00000424872 1794 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AL672296.1-201ENST00000427780 2158 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-97P-201ENST00000363387 104 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 DEFB109C-201ENST00000382575 264 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 DEFB109B-201ENST00000382656 264 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-723P-201ENST00000383973 107 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 RNU6-882P-201ENST00000391025 103 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 MIR887-201ENST00000401258 79 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AL356421.1-201ENST00000403255 413 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC098592.1-201ENST00000419352 333 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC005005.2-201ENST00000420779 380 ntBASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.79□□□□□ -1.96
C9orf40Q8IXQ3 AC244505.4-201ENST00000434905 287 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms