Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC012123.2-201ENST00000485809 248 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 AC140059.1-201ENST00000489238 361 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 AC104581.2-201ENST00000572227 430 ntBASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCUBE3Q8IX30 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 U3.10-201ENST00000364459 214 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RNA5SP132-201ENST00000364725 118 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RNU6-923P-201ENST00000364753 107 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RNA5SP30-201ENST00000365552 115 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.405-201ENST00000383979 100 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.451-201ENST00000384200 100 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.524-201ENST00000384564 100 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RNU6-1179P-201ENST00000384667 107 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.561-201ENST00000384694 100 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 GLULP6-201ENST00000399502 913 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 SPTLC1P2-201ENST00000407089 121 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RN7SKP216-201ENST00000411050 312 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 HMGB1P27-201ENST00000431429 603 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 OR6D1P-201ENST00000436165 939 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 HMGB1P25-201ENST00000468402 607 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RPL23AP65-201ENST00000475608 468 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RPS15AP34-201ENST00000487776 387 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RPS27AP13-201ENST00000498403 237 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 HMGN1P11-201ENST00000508668 303 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 OR4H12P-201ENST00000556269 907 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 H3F3AP1-201ENST00000559984 334 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 AC109446.4-201ENST00000623235 2755 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 MAPK10-338ENST00000641647 3362 ntBASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SCUBE3Q8IX30 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC018809.2-201ENST00000602436 3823 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RNA5SP131-201ENST00000365452 119 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.435-201ENST00000384095 112 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 Y_RNA.568-201ENST00000384742 113 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RNU6-131P-201ENST00000391144 107 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RNU4-34P-201ENST00000410431 124 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AF186996.5-201ENST00000418098 904 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RANP8-201ENST00000444720 713 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 EEF1B2P6-201ENST00000445713 673 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 EEF1A1P1-201ENST00000447052 739 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 MRPS33P2-201ENST00000507850 322 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RFPL4AP5-201ENST00000514977 504 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 SNORA70.11-201ENST00000515987 138 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 SNORA70.13-201ENST00000516116 138 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 RNU6-1219P-201ENST00000516143 112 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 IGBP1P1-201ENST00000554337 1009 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC044860.2-201ENST00000561005 179 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC009314.1-201ENST00000603871 304 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 AC011476.5-201ENST00000615594 130 ntBASIC5.94□□□□□ -1.46
SCUBE3Q8IX30 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms