Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NPAS4Q8IUM7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 RPL32P3-201ENST00000359025 275 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 RNU6-288P-201ENST00000363690 104 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 MIR568-201ENST00000385036 95 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LAP3P1-201ENST00000403648 294 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AL450023.3-201ENST00000440592 271 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 RPS23P7-201ENST00000466210 444 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 SCARNA22-201ENST00000503991 125 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 RNU6-927P-201ENST00000516199 100 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 Vault.1-201ENST00000516474 102 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 RNA5SP392-201ENST00000516905 112 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AP000889.2-201ENST00000532684 490 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC022893.3-201ENST00000607665 437 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC107294.1-201ENST00000609524 467 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC103705.1-201ENST00000619013 241 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 AC007546.1-201ENST00000619452 559 ntBASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS4Q8IUM7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AL590240.1-201ENST00000334118 313 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 SNORA73.1-201ENST00000363107 205 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 RN7SKP44-201ENST00000363602 316 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 Y_RNA.395-201ENST00000383945 109 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 Y_RNA.399-201ENST00000383955 105 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 Y_RNA.401-201ENST00000383965 117 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 SNORD70.1-201ENST00000391007 85 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 RN7SKP106-201ENST00000410832 272 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 TBCAP2-201ENST00000416175 326 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AL139095.3-201ENST00000419672 1203 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 RPS3AP52-201ENST00000435639 297 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC016831.4-201ENST00000438302 307 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 ARL2BPP10-201ENST00000446487 531 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 Y_RNA.635-201ENST00000459041 101 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 VN1R17P-201ENST00000472048 1090 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AL049874.1-201ENST00000489560 388 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC007016.1-201ENST00000512110 244 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC009643.1-201ENST00000532030 391 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC005951.2-201ENST00000576282 495 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC022884.2-201ENST00000578535 580 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 APOOP1-201ENST00000604695 592 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 FAM27B-201ENST00000610601 213 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 AL442067.1-201ENST00000613261 223 ntBASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS4Q8IUM7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms