Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 MIR4716-201ENST00000579628 84 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 BNIP3P25-201ENST00000596023 559 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AC025034.2-201ENST00000623264 286 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AC112484.5-201ENST00000624189 228 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 MTND4LP32-201ENST00000636111 270 ntBASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USPL1Q5W0Q7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RNU6-432P-201ENST00000384196 109 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 MIR3065-201ENST00000390137 79 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 MIR670-201ENST00000390142 98 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RN7SKP202-201ENST00000410439 330 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RN7SKP158-201ENST00000410453 326 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AL139396.1-201ENST00000421137 167 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RPL7L1P10-201ENST00000427790 463 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 CALM2P2-201ENST00000428512 440 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RPS26P2-201ENST00000440331 348 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC005094.1-201ENST00000440420 368 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RN7SL132P-201ENST00000478131 296 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC083904.1-201ENST00000487828 231 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.682-201ENST00000516457 100 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RNU6-64P-201ENST00000517119 105 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 MYL12AP1-201ENST00000518490 515 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC100870.1-201ENST00000522035 505 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AL133271.1-201ENST00000538229 291 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC079587.1-201ENST00000603846 277 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC012443.1-201ENST00000605605 231 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC112200.1-201ENST00000625015 234 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AL022311.1-201ENST00000623726 19416 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 AC103710.2-202ENST00000641454 2853 ntBASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
USPL1Q5W0Q7 MFSD8-242ENST00000641690 4199 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 MTCO1P12-201ENST00000414273 1543 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 EXOC5P1-201ENST00000510543 1969 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.144-201ENST00000363521 113 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RNU6-1284P-201ENST00000363701 100 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 Y_RNA.187-201ENST00000363918 113 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 SNORD115-7-201ENST00000365306 82 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RNU6-639P-201ENST00000384074 107 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AL109755.1-201ENST00000401791 649 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AL080315.1-201ENST00000406055 466 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RNU2-36P-201ENST00000410361 191 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RNA5SP107-201ENST00000411358 122 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RPL37P10-201ENST00000412884 288 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 snoU13.22-201ENST00000459428 104 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 RNU1-45P-201ENST00000517191 141 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AL118558.2-201ENST00000556294 238 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 TVP23BP1-201ENST00000557500 617 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 MIR4444-1-201ENST00000581696 74 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 MIR4444-2-201ENST00000584390 74 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC136443.5-201ENST00000603741 370 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC006363.1-201ENST00000603806 463 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC106900.2-201ENST00000604994 317 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AC124303.1-201ENST00000605703 360 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 AL078596.1-201ENST00000624856 447 ntBASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.59□□□□□ -1.51
USPL1Q5W0Q7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.59□□□□□ -1.52
USPL1Q5W0Q7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
USPL1Q5W0Q7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
USPL1Q5W0Q7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.59□□□□□ -1.52
USPL1Q5W0Q7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
USPL1Q5W0Q7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USPL1Q5W0Q7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms