Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR8062-201ENST00000621515 85 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 AL672167.1-205ENST00000641112 3080 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 AC104623.2-202ENST00000623477 4002 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH1Q08174 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH1Q08174 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDH1Q08174 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 Y_RNA.106-201ENST00000363189 100 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 Y_RNA.151-201ENST00000363566 112 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 Y_RNA.210-201ENST00000364161 110 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDH1Q08174 Y_RNA.447-201ENST00000384184 113 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 SNORA67-201ENST00000384423 137 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 RNU1-77P-201ENST00000390868 162 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 AC097374.1-203ENST00000400783 485 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 RNU4-78P-201ENST00000410940 126 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 PPP1R11P2-201ENST00000423543 382 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 EI24P4-201ENST00000423683 1078 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 CYCSP6-201ENST00000434498 302 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH1Q08174 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.02□□□□□ -1.61
PCDH1Q08174 FTH1P25-201ENST00000447665 469 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 RPL7L1P1-201ENST00000448259 785 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH1Q08174 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH1Q08174 Z92846.1-201ENST00000456203 268 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 RPL21P41-201ENST00000459863 264 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 OR2AO1P-201ENST00000476497 403 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AC114801.2-201ENST00000503825 781 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH1Q08174 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDH1Q08174 Z98751.3-201ENST00000604447 521 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 HMGN2P28-201ENST00000606102 262 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AP005432.2-201ENST00000608162 586 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AC022467.1-201ENST00000614738 749 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 SDR42E1P2-201ENST00000614861 481 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 MIR4275-201ENST00000636486 87 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
PCDH1Q08174 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDH1Q08174 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDH1Q08174 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDH1Q08174 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDH1Q08174 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH1Q08174 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH1Q08174 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDH1Q08174 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 RN7SKP162-201ENST00000363605 345 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 Y_RNA.314-201ENST00000365114 102 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RNU6-1329P-201ENST00000365664 107 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 MIR105-1-201ENST00000385222 81 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AL391361.1-201ENST00000405580 489 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 MIR1252-201ENST00000408861 65 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC108075.1-201ENST00000424692 529 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AL158071.1-201ENST00000430315 461 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDH1Q08174 RPL21P2-201ENST00000440049 481 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 DYNLT3P2-201ENST00000442517 295 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH1Q08174 RPS21P4-201ENST00000487122 248 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RN7SL629P-201ENST00000489622 285 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RN7SL441P-201ENST00000492388 296 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RPS27AP13-201ENST00000498403 237 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RNU6-408P-201ENST00000515910 100 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RNU6-1143P-201ENST00000516125 104 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RN7SKP258-201ENST00000517151 304 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms