Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CDC42EP1Q00587 AC011266.1-201ENST00000624119 3569 ntBASIC4.34□□□□□ -1.72
CDC42EP1Q00587 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CDC42EP1Q00587 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDC42EP1Q00587 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 MTND5P3-201ENST00000438536 1800 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 SNORA62.3-201ENST00000365110 153 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AL590704.1-201ENST00000402856 794 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 FGF7P8-201ENST00000402994 292 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC009237.5-201ENST00000414271 501 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 HMGB1P37-201ENST00000439613 609 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 RPS15AP9-201ENST00000439856 381 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 RN7SL542P-201ENST00000467147 294 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC135721.1-201ENST00000497954 479 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC023632.4-201ENST00000517783 191 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC034105.3-201ENST00000565294 442 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC103710.2-201ENST00000609912 942 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC131238.1-201ENST00000617135 328 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AL136313.1-201ENST00000624804 202 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 AC005609.4-201ENST00000625071 447 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 MAPK10-372ENST00000641954 3413 ntBASIC4.33□□□□□ -1.72
CDC42EP1Q00587 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDC42EP1Q00587 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 ZNF680P1-201ENST00000436625 1469 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 CASC19-280ENST00000642102 1351 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 Z73965.1-201ENST00000623412 2297 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 RNU6-39P-201ENST00000384344 107 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 RNU6-876P-201ENST00000391295 104 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AL606489.2-201ENST00000433886 234 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AL138799.3-201ENST00000438968 350 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 MTND3P10-201ENST00000450967 341 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 PPIAP15-201ENST00000479662 484 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 RNU6-1095P-201ENST00000516148 108 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 SNORA67.7-201ENST00000516664 135 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 DEFB108D-201ENST00000527787 222 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 HMGB1P6-201ENST00000569046 646 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 MIR3158-1-201ENST00000583596 81 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC005344.1-201ENST00000613391 459 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AC244100.1-202ENST00000621554 382 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 DUXAP9-208ENST00000622815 614 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 FER-210ENST00000628534 558 ntTSL 5 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 MIR3662-201ENST00000637030 95 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 MAPK10-349ENST00000641767 3661 ntBASIC4.32□□□□□ -1.72
CDC42EP1Q00587 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.32□□□□□ -1.72
CDC42EP1Q00587 AP004289.2-201ENST00000444413 1457 ntBASIC4.31□□□□□ -1.72
CDC42EP1Q00587 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.31□□□□□ -1.72
CDC42EP1Q00587 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDC42EP1Q00587 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDC42EP1Q00587 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.31□□□□□ -1.72
CDC42EP1Q00587 Y_RNA.38-201ENST00000362617 102 ntBASIC4.31□□□□□ -1.72
CDC42EP1Q00587 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDC42EP1Q00587 MIR30B-201ENST00000384850 88 ntBASIC4.31□□□□□ -1.72
CDC42EP1Q00587 MIR200C-201ENST00000384980 68 ntBASIC4.31□□□□□ -1.72
CDC42EP1Q00587 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms