Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH12P55289 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH12P55289 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH12P55289 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 MTCO1P9-201ENST00000505577 1534 ntBASIC3.56□□□□□ -1.84
CDH12P55289 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 AL136964.1-201ENST00000622038 2990 ntBASIC3.56□□□□□ -1.84
CDH12P55289 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH12P55289 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH12P55289 Y_RNA.9-201ENST00000362354 101 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RNU6-637P-201ENST00000384050 107 ntBASIC3.56□□□□□ -1.84
CDH12P55289 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RNU4-6P-201ENST00000410804 122 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RNU6-516P-201ENST00000411381 104 ntBASIC3.56□□□□□ -1.84
CDH12P55289 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDH12P55289 SSXP9-201ENST00000417503 292 ntBASIC3.56□□□□□ -1.84
CDH12P55289 HMGB3P20-201ENST00000417997 600 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 AL691449.1-201ENST00000426570 421 ntBASIC3.56□□□□□ -1.84
CDH12P55289 DPPA2P1-201ENST00000428060 556 ntBASIC3.56□□□□□ -1.84
CDH12P55289 MTND1P2-201ENST00000430604 821 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC016712.1-201ENST00000431088 378 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 RPS15AP9-201ENST00000439856 381 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 AC108059.3-201ENST00000456388 214 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RNU7-59P-201ENST00000459101 61 ntBASIC3.56□□□□□ -1.84
CDH12P55289 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 AC010618.1-201ENST00000469924 477 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC092989.1-201ENST00000481235 277 ntBASIC3.56□□□□□ -1.84
CDH12P55289 MTAPP1-201ENST00000489154 819 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RPL7P23-201ENST00000493874 747 ntBASIC3.56□□□□□ -1.84
CDH12P55289 FAM92A1P2-202ENST00000504766 877 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC020593.1-201ENST00000507399 299 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC105914.1-201ENST00000511798 226 ntBASIC3.56□□□□□ -1.84
CDH12P55289 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH12P55289 AC114797.1-201ENST00000514003 728 ntBASIC3.56□□□□□ -1.84
CDH12P55289 SCARNA24.1-201ENST00000516465 137 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RNU6-1178P-201ENST00000516674 107 ntBASIC3.56□□□□□ -1.84
CDH12P55289 OR5AQ1P-201ENST00000527596 927 ntBASIC3.56□□□□□ -1.84
CDH12P55289 DEFB108D-201ENST00000527787 222 ntBASIC3.56□□□□□ -1.84
CDH12P55289 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.56□□□□□ -1.84
CDH12P55289 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH12P55289 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 CBX3P5-201ENST00000552017 521 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 AC025884.1-201ENST00000556034 378 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH12P55289 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 BNIP3P33-201ENST00000598912 569 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AL109618.2-201ENST00000605527 211 ntBASIC3.56□□□□□ -1.84
CDH12P55289 RNU4-89P-201ENST00000607443 133 ntBASIC3.56□□□□□ -1.84
CDH12P55289 AC017083.3-201ENST00000609955 700 ntBASIC3.56□□□□□ -1.84
CDH12P55289 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDH12P55289 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CDH12P55289 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH12P55289 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH12P55289 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CDH12P55289 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CDH12P55289 RNU6-1090P-201ENST00000364065 94 ntBASIC3.55□□□□□ -1.84
CDH12P55289 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH12P55289 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 RNU6-629P-201ENST00000384061 103 ntBASIC3.55□□□□□ -1.84
CDH12P55289 RNU6-456P-201ENST00000384493 107 ntBASIC3.55□□□□□ -1.84
CDH12P55289 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 AL356095.1-201ENST00000417217 199 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AL137014.1-201ENST00000420490 1226 ntBASIC3.55□□□□□ -1.84
CDH12P55289 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.55□□□□□ -1.84
CDH12P55289 RPL23AP30-201ENST00000432419 501 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC122718.1-201ENST00000439448 744 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC093156.1-201ENST00000440382 670 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 MTATP6P30-201ENST00000443540 664 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 MTND2P24-201ENST00000453434 806 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH12P55289 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 FAM133DP-201ENST00000464802 691 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC084198.1-201ENST00000477747 402 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AP000926.1-201ENST00000479573 241 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH12P55289 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH12P55289 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 Y_RNA.704-201ENST00000516851 102 ntBASIC3.55□□□□□ -1.84
CDH12P55289 RN7SKP209-201ENST00000516888 304 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH12P55289 AP003072.2-201ENST00000527756 676 ntBASIC3.55□□□□□ -1.84
CDH12P55289 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH12P55289 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms