Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
CDH11P55287 USP8P1-201ENST00000494673 3183 ntBASIC3.29□□□□□ -1.88
CDH11P55287 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CDH11P55287 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH11P55287 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 AC011460.1-201ENST00000636268 1834 ntBASIC3.28□□□□□ -1.88
CDH11P55287 GABPAP-201ENST00000419271 1356 ntBASIC3.28□□□□□ -1.88
CDH11P55287 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
CDH11P55287 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH11P55287 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 OR5H15-201ENST00000383696 930 ntBASIC3.28□□□□□ -1.88
CDH11P55287 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH11P55287 SNORA40.3-201ENST00000390964 122 ntBASIC3.28□□□□□ -1.88
CDH11P55287 MTHFD2P2-201ENST00000407725 247 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AC007899.1-201ENST00000412776 775 ntBASIC3.28□□□□□ -1.88
CDH11P55287 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH11P55287 BEND7P1-201ENST00000422058 457 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH11P55287 YME1L1P1-201ENST00000429435 297 ntBASIC3.28□□□□□ -1.88
CDH11P55287 USP9YP14-201ENST00000430663 563 ntBASIC3.28□□□□□ -1.88
CDH11P55287 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH11P55287 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 MTND6P13-201ENST00000443510 523 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AC010655.1-201ENST00000449336 292 ntBASIC3.28□□□□□ -1.88
CDH11P55287 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
CDH11P55287 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH11P55287 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 MTND1P9-201ENST00000453775 944 ntBASIC3.28□□□□□ -1.88
CDH11P55287 RPS20P32-201ENST00000456044 356 ntBASIC3.28□□□□□ -1.88
CDH11P55287 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH11P55287 LARP1BP2-201ENST00000486594 519 ntBASIC3.28□□□□□ -1.88
CDH11P55287 RPL7P23-201ENST00000493874 747 ntBASIC3.28□□□□□ -1.88
CDH11P55287 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH11P55287 AP003467.2-201ENST00000520175 319 ntBASIC3.28□□□□□ -1.88
CDH11P55287 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 SETP2-201ENST00000553886 926 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH11P55287 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH11P55287 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH11P55287 OR4K8P-201ENST00000578842 1048 ntBASIC3.28□□□□□ -1.88
CDH11P55287 MIR3944-201ENST00000581277 108 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AP001429.1-201ENST00000602568 530 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AC146944.4-201ENST00000602697 718 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AP000254.1-201ENST00000609934 520 ntBASIC3.28□□□□□ -1.88
CDH11P55287 HULC.1-201ENST00000612720 240 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AC008121.2-201ENST00000614647 523 ntBASIC3.28□□□□□ -1.88
CDH11P55287 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH11P55287 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH11P55287 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
CDH11P55287 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH11P55287 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 RIOK3P1-201ENST00000418778 1528 ntBASIC3.28□□□□□ -1.88
CDH11P55287 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH11P55287 AC024560.2-201ENST00000507981 1497 ntBASIC3.28□□□□□ -1.88
CDH11P55287 AP001148.1-201ENST00000624124 2359 ntBASIC3.27□□□□□ -1.89
CDH11P55287 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH11P55287 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH11P55287 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH11P55287 RNA5SP167-201ENST00000365461 116 ntBASIC3.27□□□□□ -1.89
CDH11P55287 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH11P55287 SNORD3H-201ENST00000384486 214 ntBASIC3.27□□□□□ -1.89
CDH11P55287 Y_RNA.559-201ENST00000384686 107 ntBASIC3.27□□□□□ -1.89
CDH11P55287 MIR7-3-201ENST00000384898 110 ntBASIC3.27□□□□□ -1.89
CDH11P55287 SOD2P1-201ENST00000396543 562 ntBASIC3.27□□□□□ -1.89
CDH11P55287 CCNG1P1-201ENST00000406783 885 ntBASIC3.27□□□□□ -1.89
CDH11P55287 RPS3AP3-201ENST00000411933 242 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AL035423.1-201ENST00000420331 213 ntBASIC3.27□□□□□ -1.89
CDH11P55287 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 AL033528.1-201ENST00000453780 140 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH11P55287 HMGB3P30-201ENST00000457863 606 ntBASIC3.27□□□□□ -1.89
CDH11P55287 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AP004371.1-201ENST00000525240 214 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH11P55287 AC123904.2-201ENST00000548059 300 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH11P55287 MIR4528-201ENST00000577763 90 ntBASIC3.27□□□□□ -1.89
CDH11P55287 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH11P55287 HMGN1P30-201ENST00000589286 268 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms