Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NEDD4P46934 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD4P46934 RNU6-1200P-201ENST00000384162 107 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 MIR634-201ENST00000385208 97 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD4P46934 TPMTP2-201ENST00000414372 726 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.32□□□□□ -1.88
NEDD4P46934 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 ZYG11AP1-201ENST00000430329 837 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 MTND5P2-201ENST00000442927 1142 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 RPL23AP62-201ENST00000463396 453 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AP002884.2-201ENST00000471647 395 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.32□□□□□ -1.88
NEDD4P46934 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.32□□□□□ -1.88
NEDD4P46934 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD4P46934 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD4P46934 AC104685.1-201ENST00000502445 371 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 MTND1P22-201ENST00000510572 951 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.32□□□□□ -1.88
NEDD4P46934 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.32□□□□□ -1.88
NEDD4P46934 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
NEDD4P46934 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.32□□□□□ -1.88
NEDD4P46934 MTND3P12-201ENST00000559068 328 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 LARP7P3-201ENST00000579888 337 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.32□□□□□ -1.88
NEDD4P46934 CLIC4P2-201ENST00000601934 717 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AC006329.2-201ENST00000611491 394 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AL357080.1-201ENST00000617394 239 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 C2orf27A-204ENST00000623058 969 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AC019226.2-201ENST00000625973 424 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AC097655.1-201ENST00000635075 318 ntBASIC3.32□□□□□ -1.88
NEDD4P46934 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.32□□□□□ -1.88
NEDD4P46934 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD4P46934 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEDD4P46934 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.32□□□□□ -1.88
NEDD4P46934 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
NEDD4P46934 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NEDD4P46934 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD4P46934 AP000526.1-201ENST00000603308 1388 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 RNU6-462P-201ENST00000362659 105 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD4P46934 U3.29-201ENST00000391296 212 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AL590084.2-201ENST00000401481 382 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 MTATP6P27-201ENST00000416987 621 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AC244098.2-201ENST00000422068 99 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 PSMA6P3-201ENST00000428242 164 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 SNRPEP7-201ENST00000438350 220 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 HMGB3P30-201ENST00000457863 606 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 RNU7-136P-201ENST00000458819 69 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 RPS3AP22-201ENST00000488297 769 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.31□□□□□ -1.88
NEDD4P46934 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
NEDD4P46934 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NEDD4P46934 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.31□□□□□ -1.88
NEDD4P46934 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD4P46934 AP000857.1-201ENST00000532151 543 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.31□□□□□ -1.88
NEDD4P46934 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD4P46934 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD4P46934 AC008751.2-201ENST00000597885 980 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AL139344.1-201ENST00000605228 195 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AL360219.1-201ENST00000610230 366 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 AL607023.1-201ENST00000620045 248 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD4P46934 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.31□□□□□ -1.88
NEDD4P46934 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD4P46934 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.31□□□□□ -1.88
NEDD4P46934 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.31□□□□□ -1.88
NEDD4P46934 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NEDD4P46934 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.31□□□□□ -1.88
NEDD4P46934 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.31□□□□□ -1.88
NEDD4P46934 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD4P46934 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEDD4P46934 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NEDD4P46934 RNU1-112P-201ENST00000364401 164 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AL031679.1-201ENST00000400616 525 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 DHFRP6-201ENST00000401776 268 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
NEDD4P46934 RNU2-15P-201ENST00000410692 191 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 COTL1P1-201ENST00000422309 375 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC092832.1-201ENST00000422934 400 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC019178.2-201ENST00000423595 505 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 EZH2P1-201ENST00000431167 291 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 MUPP-201ENST00000438111 566 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC105272.1-201ENST00000438604 198 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AL831737.1-201ENST00000441288 271 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.3□□□□□ -1.88
NEDD4P46934 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.3□□□□□ -1.88
NEDD4P46934 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD4P46934 AL445669.2-201ENST00000454425 421 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.3□□□□□ -1.88
NEDD4P46934 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD4P46934 MRPS33P3-201ENST00000513456 322 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 RNU6-150P-201ENST00000516237 95 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 RNU6-678P-201ENST00000516832 109 ntBASIC3.3□□□□□ -1.88
NEDD4P46934 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.3□□□□□ -1.88
NEDD4P46934 MTND2P38-201ENST00000522536 667 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms