Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL627309.6-201ENST00000606857 840 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC009570.1-201ENST00000609599 745 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL138478.1-201ENST00000612252 832 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 PART1_2.1-201ENST00000612397 250 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AL121895.2-201ENST00000619558 447 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC090772.4-201ENST00000623599 362 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXA9P31269 OR4G3P-201ENST00000633500 913 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 MIR6733-201ENST00000635723 61 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC068620.4-201ENST00000636730 1182 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC138915.1-201ENST00000565427 1685 ntBASIC2.78□□□□□ -1.96
HOXA9P31269 AC010733.2-201ENST00000589496 5702 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
HOXA9P31269 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HOXA9P31269 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HOXA9P31269 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.77□□□□□ -1.97
HOXA9P31269 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HOXA9P31269 SNORA70B-201ENST00000384210 135 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 MIR649-201ENST00000384843 97 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HOXA9P31269 FO393413.1-201ENST00000402892 195 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 LUZP4P1-201ENST00000415420 344 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
HOXA9P31269 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.77□□□□□ -1.97
HOXA9P31269 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.77□□□□□ -1.97
HOXA9P31269 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
HOXA9P31269 NANOGP2-201ENST00000435391 727 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 GTF2IP7-202ENST00000436677 309 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 NDUFA5P7-201ENST00000452914 242 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXA9P31269 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXA9P31269 AC087373.1-201ENST00000524920 491 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 UBTFL10-201ENST00000528532 562 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AC125611.2-201ENST00000551907 647 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AC090695.1-201ENST00000561269 1222 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXA9P31269 MTND3P13-201ENST00000574391 343 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXA9P31269 AC104984.5-201ENST00000586878 94 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AC079089.3-201ENST00000603094 673 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AC136601.2-201ENST00000604356 474 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AC019159.1-201ENST00000605094 187 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AL020991.1-201ENST00000612314 373 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AL355810.1-201ENST00000614629 552 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 AC109454.4-201ENST00000623411 649 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HOXA9P31269 AC092447.7-201ENST00000422212 1621 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HOXA9P31269 SGO1P2-201ENST00000429458 1589 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HOXA9P31269 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HOXA9P31269 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.77□□□□□ -1.97
HOXA9P31269 AP005901.5-201ENST00000545779 1796 ntBASIC2.77□□□□□ -1.97
HOXA9P31269 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HOXA9P31269 HMGB1P5-201ENST00000255320 642 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXA9P31269 RNA5SP258-201ENST00000362750 119 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 snoZ40.1-201ENST00000364540 72 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HOXA9P31269 SNORA40.2-201ENST00000390847 128 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL121978.1-201ENST00000402778 359 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 MTCO2P8-201ENST00000412213 658 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 RPLP0P7-201ENST00000416050 667 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AC092634.6-201ENST00000418558 192 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 MTCO1P3-201ENST00000429327 192 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 SEPT7P5-201ENST00000434048 306 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 AL121890.1-201ENST00000435457 205 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HOXA9P31269 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 TRBV12-1-201ENST00000479785 344 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.76□□□□□ -1.97
HOXA9P31269 RNA5SP24-201ENST00000516478 95 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 RPL7P20-201ENST00000520308 745 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AP001317.1-201ENST00000531194 960 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 NBEAP1-201ENST00000554452 979 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 AC093519.1-201ENST00000566109 298 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 MIR4509-3-201ENST00000578671 94 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 MIR4509-2-201ENST00000583920 94 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AC015688.2-201ENST00000584523 262 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.76□□□□□ -1.97
HOXA9P31269 BNIP3P40-201ENST00000596017 556 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL157392.4-201ENST00000609756 345 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 MIR4509-1-201ENST00000618224 94 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AL360181.4-201ENST00000621752 134 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AC025034.2-201ENST00000623264 286 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 AC099654.7-201ENST00000635788 2127 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 ZNF663P-202ENST00000641770 1131 ntBASIC2.76□□□□□ -1.97
HOXA9P31269 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HOXA9P31269 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
HOXA9P31269 AC090740.1-201ENST00000623193 2262 ntBASIC2.75□□□□□ -1.97
HOXA9P31269 ZNF29P-201ENST00000225587 168 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms