Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 RNU6-1167P-201ENST00000363227 94 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 RNU6-1085P-201ENST00000363576 107 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 SNORA24.1-201ENST00000384401 135 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 RPL17P50-201ENST00000396131 546 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 RPS4XP3-201ENST00000398541 413 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 FCF1P9-201ENST00000412546 282 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 OR51A5P-201ENST00000415429 942 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 AL109913.1-201ENST00000421173 514 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 RPL21P91-201ENST00000429231 479 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC007919.1-201ENST00000429380 217 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC092573.2-201ENST00000434546 243 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.82□□□□□ -1.8
TNFSF4P23510 RPS29P33-201ENST00000456717 146 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 RNU7-182P-201ENST00000459009 62 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 RPS27AP17-201ENST00000463344 455 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 MRPS17P3-201ENST00000465453 385 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC108078.2-201ENST00000510750 236 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 RANP9-201ENST00000519957 271 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 CASP1P1-201ENST00000526345 212 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 OR5B19P-201ENST00000531766 928 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TNFSF4P23510 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 TPRKBP2-201ENST00000565969 475 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC005951.1-201ENST00000576706 485 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 MIR4284-201ENST00000578924 81 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC024619.4-201ENST00000580924 316 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 RPL12P25-202ENST00000598100 674 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AP003465.2-201ENST00000602571 373 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC010591.1-201ENST00000603941 649 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF4P23510 MIR6076-201ENST00000617521 113 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC025034.2-201ENST00000623264 286 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 AC027309.3-201ENST00000623419 351 ntBASIC3.82□□□□□ -1.8
TNFSF4P23510 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TNFSF4P23510 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF4P23510 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 AC068254.2-201ENST00000623938 3577 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC011266.1-201ENST00000624119 3569 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF4P23510 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 RNU6-517P-201ENST00000384362 110 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 RNA5SP372-201ENST00000390836 115 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 RNU2-9P-201ENST00000410194 145 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 AC114491.1-201ENST00000416095 246 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 BTF3L4P3-201ENST00000418879 476 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 AL356387.2-201ENST00000422272 243 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF4P23510 RPL23AP1-201ENST00000428990 471 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 RPS15AP9-201ENST00000439856 381 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 MTND4P25-201ENST00000441039 533 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 PIGFP3-201ENST00000441918 722 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC027673.1-201ENST00000456245 405 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AL356010.1-201ENST00000456364 102 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF4P23510 KC877373.1-201ENST00000479066 408 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC010460.1-201ENST00000507087 466 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 AC093840.1-201ENST00000511599 336 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 MTND4LP31-201ENST00000514859 294 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 RAB9BP1-201ENST00000519581 626 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms