Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.09□□□□□ -1.91
TOP1P11387 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.09□□□□□ -1.91
TOP1P11387 AL136360.1-201ENST00000503377 1900 ntBASIC3.09□□□□□ -1.92
TOP1P11387 MTCO1P23-201ENST00000415223 1526 ntBASIC3.09□□□□□ -1.92
TOP1P11387 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TOP1P11387 AC008568.2-201ENST00000623862 2313 ntBASIC3.08□□□□□ -1.92
TOP1P11387 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.08□□□□□ -1.92
TOP1P11387 RNU5B-1-201ENST00000363286 116 ntBASIC3.08□□□□□ -1.92
TOP1P11387 SNORD21-201ENST00000383953 95 ntBASIC3.08□□□□□ -1.92
TOP1P11387 RNU6-549P-201ENST00000384433 107 ntBASIC3.08□□□□□ -1.92
TOP1P11387 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TOP1P11387 RNU6-298P-201ENST00000390888 96 ntBASIC3.08□□□□□ -1.92
TOP1P11387 RNA5SP492-201ENST00000411330 114 ntBASIC3.08□□□□□ -1.92
TOP1P11387 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 UBBP3-201ENST00000445497 241 ntBASIC3.08□□□□□ -1.92
TOP1P11387 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 RFC5P1-201ENST00000454419 874 ntBASIC3.08□□□□□ -1.92
TOP1P11387 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.08□□□□□ -1.92
TOP1P11387 AC008427.1-201ENST00000503102 655 ntBASIC3.08□□□□□ -1.92
TOP1P11387 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 RNU4-29P-201ENST00000515943 174 ntBASIC3.08□□□□□ -1.92
TOP1P11387 RNU6-885P-201ENST00000516607 104 ntBASIC3.08□□□□□ -1.92
TOP1P11387 AC118942.1-201ENST00000529674 1035 ntBASIC3.08□□□□□ -1.92
TOP1P11387 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 HSPE1P20-201ENST00000538133 289 ntBASIC3.08□□□□□ -1.92
TOP1P11387 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 SETP2-201ENST00000553886 926 ntBASIC3.08□□□□□ -1.92
TOP1P11387 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.08□□□□□ -1.92
TOP1P11387 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 NRBF2P5-201ENST00000603087 788 ntBASIC3.08□□□□□ -1.92
TOP1P11387 RPL23AP92-201ENST00000603609 255 ntBASIC3.08□□□□□ -1.92
TOP1P11387 AC069431.2-201ENST00000604149 1099 ntBASIC3.08□□□□□ -1.92
TOP1P11387 AC002487.1-201ENST00000604565 994 ntBASIC3.08□□□□□ -1.92
TOP1P11387 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TOP1P11387 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.08□□□□□ -1.92
TOP1P11387 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.08□□□□□ -1.92
TOP1P11387 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TOP1P11387 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
TOP1P11387 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
TOP1P11387 U6.112-201ENST00000384129 70 ntBASIC3.07□□□□□ -1.92
TOP1P11387 MIR592-201ENST00000384959 97 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RNU6-882P-201ENST00000391025 103 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AL592114.1-201ENST00000403842 483 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RPLP0P7-201ENST00000416050 667 ntBASIC3.07□□□□□ -1.92
TOP1P11387 SFR1P2-201ENST00000421841 730 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
TOP1P11387 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.07□□□□□ -1.92
TOP1P11387 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP1P11387 AL121871.1-201ENST00000443413 436 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.07□□□□□ -1.92
TOP1P11387 RNU7-140P-201ENST00000459546 60 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC011979.1-201ENST00000472300 483 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RPL21P93-201ENST00000480465 489 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC233702.1-201ENST00000482905 502 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC087190.1-201ENST00000484462 480 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
TOP1P11387 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
TOP1P11387 KLRA1P-201ENST00000503499 986 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP1P11387 SNORA19.3-201ENST00000516165 130 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC027309.2-201ENST00000520566 192 ntBASIC3.07□□□□□ -1.92
TOP1P11387 DEFB108D-201ENST00000527787 222 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP1P11387 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.07□□□□□ -1.92
TOP1P11387 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.07□□□□□ -1.92
TOP1P11387 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.07□□□□□ -1.92
TOP1P11387 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP1P11387 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TOP1P11387 MIR3921-201ENST00000577308 85 ntBASIC3.07□□□□□ -1.92
TOP1P11387 MIR4760-201ENST00000585040 80 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP1P11387 AC010620.2-201ENST00000600135 313 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC023510.2-201ENST00000622162 746 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC026634.1-201ENST00000634369 198 ntBASIC3.07□□□□□ -1.92
TOP1P11387 ZNF519P1-201ENST00000449011 1626 ntBASIC3.07□□□□□ -1.92
TOP1P11387 AC010680.1-201ENST00000590024 3590 ntBASIC3.07□□□□□ -1.92
TOP1P11387 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TOP1P11387 FTLP6-201ENST00000355274 422 ntBASIC3.06□□□□□ -1.92
TOP1P11387 RNU5E-10P-201ENST00000363506 118 ntBASIC3.06□□□□□ -1.92
TOP1P11387 SNORD56.5-201ENST00000364281 72 ntBASIC3.06□□□□□ -1.92
TOP1P11387 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TOP1P11387 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.06□□□□□ -1.92
TOP1P11387 RNU6-878P-201ENST00000384578 110 ntBASIC3.06□□□□□ -1.92
TOP1P11387 MCTS2P-201ENST00000394552 546 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC016769.3-201ENST00000396562 315 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AL139039.1-201ENST00000401900 692 ntBASIC3.06□□□□□ -1.92
TOP1P11387 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
TOP1P11387 VN1R51P-201ENST00000411675 945 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC092638.1-201ENST00000411966 1275 ntBASIC3.06□□□□□ -1.92
TOP1P11387 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms