Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.79□□□□□ -1.96
RETP07949 AP000857.1-201ENST00000532151 543 ntBASIC2.79□□□□□ -1.96
RETP07949 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.79□□□□□ -1.96
RETP07949 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.79□□□□□ -1.96
RETP07949 AC128657.1-201ENST00000549459 145 ntBASIC2.79□□□□□ -1.96
RETP07949 LSM6P2-201ENST00000552208 177 ntBASIC2.79□□□□□ -1.96
RETP07949 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.79□□□□□ -1.96
RETP07949 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
RETP07949 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.79□□□□□ -1.96
RETP07949 AC090115.4-201ENST00000609970 188 ntBASIC2.79□□□□□ -1.96
RETP07949 AL020991.1-201ENST00000612314 373 ntBASIC2.79□□□□□ -1.96
RETP07949 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.79□□□□□ -1.96
RETP07949 AC099654.9-201ENST00000637055 678 ntBASIC2.79□□□□□ -1.96
RETP07949 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.79□□□□□ -1.96
RETP07949 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RETP07949 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.78□□□□□ -1.96
RETP07949 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.78□□□□□ -1.96
RETP07949 RNU6-1249P-201ENST00000363237 111 ntBASIC2.78□□□□□ -1.96
RETP07949 RNU6-1180P-201ENST00000364935 107 ntBASIC2.78□□□□□ -1.96
RETP07949 SNORD82-201ENST00000365530 70 ntBASIC2.78□□□□□ -1.96
RETP07949 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RETP07949 SNORA3.2-201ENST00000408221 125 ntBASIC2.78□□□□□ -1.96
RETP07949 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.78□□□□□ -1.96
RETP07949 RPL21P32-201ENST00000419877 477 ntBASIC2.78□□□□□ -1.96
RETP07949 HMGN2P30-201ENST00000423237 256 ntBASIC2.78□□□□□ -1.96
RETP07949 AC092634.2-201ENST00000428146 1010 ntBASIC2.78□□□□□ -1.96
RETP07949 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.78□□□□□ -1.96
RETP07949 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.78□□□□□ -1.96
RETP07949 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.78□□□□□ -1.96
RETP07949 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.78□□□□□ -1.96
RETP07949 AC004022.1-201ENST00000447766 1066 ntBASIC2.78□□□□□ -1.96
RETP07949 AL162389.1-201ENST00000449233 177 ntBASIC2.78□□□□□ -1.96
RETP07949 AC009961.3-201ENST00000449832 765 ntBASIC2.78□□□□□ -1.96
RETP07949 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.78□□□□□ -1.96
RETP07949 PABPC1P3-201ENST00000469174 459 ntBASIC2.78□□□□□ -1.96
RETP07949 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.78□□□□□ -1.96
RETP07949 AC004062.1-201ENST00000509926 645 ntBASIC2.78□□□□□ -1.96
RETP07949 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.78□□□□□ -1.96
RETP07949 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.78□□□□□ -1.96
RETP07949 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RETP07949 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
RETP07949 SCARNA1-201ENST00000517138 166 ntBASIC2.78□□□□□ -1.96
RETP07949 SNORA31.21-201ENST00000517180 77 ntBASIC2.78□□□□□ -1.96
RETP07949 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.78□□□□□ -1.96
RETP07949 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.78□□□□□ -1.96
RETP07949 COX6CP3-201ENST00000580869 223 ntBASIC2.78□□□□□ -1.96
RETP07949 AC079089.3-201ENST00000603094 673 ntBASIC2.78□□□□□ -1.96
RETP07949 AL445435.1-201ENST00000604232 665 ntBASIC2.78□□□□□ -1.96
RETP07949 AL121652.1-201ENST00000608851 448 ntBASIC2.78□□□□□ -1.96
RETP07949 AC140725.3-201ENST00000616193 880 ntBASIC2.78□□□□□ -1.96
RETP07949 AC073968.1-201ENST00000618594 637 ntBASIC2.78□□□□□ -1.96
RETP07949 AC084824.4-201ENST00000620106 731 ntBASIC2.78□□□□□ -1.96
RETP07949 AC040168.1-201ENST00000623594 991 ntBASIC2.78□□□□□ -1.96
RETP07949 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.78□□□□□ -1.96
RETP07949 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RETP07949 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RETP07949 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.77□□□□□ -1.97
RETP07949 AC026241.1-201ENST00000517873 2142 ntBASIC2.77□□□□□ -1.97
RETP07949 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RETP07949 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.77□□□□□ -1.97
RETP07949 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RETP07949 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
RETP07949 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RETP07949 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RETP07949 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
RETP07949 RNU6-839P-201ENST00000363347 108 ntBASIC2.77□□□□□ -1.97
RETP07949 RNU5E-10P-201ENST00000363506 118 ntBASIC2.77□□□□□ -1.97
RETP07949 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
RETP07949 MIR217-201ENST00000384817 110 ntBASIC2.77□□□□□ -1.97
RETP07949 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
RETP07949 AL023807.1-201ENST00000407932 359 ntBASIC2.77□□□□□ -1.97
RETP07949 RPL7P8-201ENST00000411964 730 ntBASIC2.77□□□□□ -1.97
RETP07949 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.77□□□□□ -1.97
RETP07949 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.77□□□□□ -1.97
RETP07949 USP9YP21-201ENST00000420603 432 ntBASIC2.77□□□□□ -1.97
RETP07949 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.77□□□□□ -1.97
RETP07949 C1DP1-201ENST00000426049 402 ntBASIC2.77□□□□□ -1.97
RETP07949 AC079780.1-201ENST00000428259 207 ntBASIC2.77□□□□□ -1.97
RETP07949 RABEPKP1-201ENST00000440529 1026 ntBASIC2.77□□□□□ -1.97
RETP07949 MRPL42P4-201ENST00000453267 443 ntBASIC2.77□□□□□ -1.97
RETP07949 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.77□□□□□ -1.97
RETP07949 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RETP07949 RNA5SP135-201ENST00000517019 125 ntBASIC2.77□□□□□ -1.97
RETP07949 AC025881.1-201ENST00000518851 512 ntBASIC2.77□□□□□ -1.97
RETP07949 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.77□□□□□ -1.97
RETP07949 AC104417.1-201ENST00000523974 751 ntBASIC2.77□□□□□ -1.97
RETP07949 FAM60DP-201ENST00000524174 632 ntBASIC2.77□□□□□ -1.97
RETP07949 ATP5F1P5-201ENST00000526403 760 ntBASIC2.77□□□□□ -1.97
RETP07949 OR4P1P-201ENST00000530808 1136 ntBASIC2.77□□□□□ -1.97
RETP07949 AP001317.1-201ENST00000531194 960 ntBASIC2.77□□□□□ -1.97
RETP07949 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.77□□□□□ -1.97
RETP07949 AC090502.2-201ENST00000549267 280 ntBASIC2.77□□□□□ -1.97
RETP07949 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.77□□□□□ -1.97
RETP07949 DEFB122-202ENST00000569013 197 ntBASIC2.77□□□□□ -1.97
RETP07949 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.77□□□□□ -1.97
RETP07949 AL022067.1-201ENST00000602426 454 ntBASIC2.77□□□□□ -1.97
RETP07949 AP000787.2-201ENST00000604432 568 ntBASIC2.77□□□□□ -1.97
RETP07949 AP003973.1-201ENST00000604639 691 ntBASIC2.77□□□□□ -1.97
RETP07949 AC092954.1-201ENST00000609121 445 ntBASIC2.77□□□□□ -1.97
RETP07949 AC025034.2-201ENST00000623264 286 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms