Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFAP04085 HSPD1P21-201ENST00000436541 245 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 OSTCP8-201ENST00000445117 448 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 KNOP1P3-201ENST00000446933 426 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC069499.1-201ENST00000489433 509 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC104564.1-201ENST00000493028 407 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFAP04085 RNY3P15-201ENST00000516297 97 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 RN7SKP66-201ENST00000516681 231 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AP005902.1-201ENST00000521358 186 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFAP04085 AC022882.1-201ENST00000532142 501 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.12□□□□□ -1.59
PDGFAP04085 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.12□□□□□ -1.59
PDGFAP04085 MIR4472-2-201ENST00000582069 67 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 MIR4273-201ENST00000582824 84 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC025574.2-201ENST00000615621 514 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC100827.5-201ENST00000615883 426 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PDGFAP04085 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
PDGFAP04085 LINC01963-201ENST00000562038 3148 ntBASIC5.12□□□□□ -1.59
PDGFAP04085 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFAP04085 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.12□□□□□ -1.59
PDGFAP04085 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
PDGFAP04085 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDGFAP04085 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFAP04085 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFAP04085 AL049555.1-201ENST00000562834 1933 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFAP04085 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFAP04085 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PDGFAP04085 MIR133B-201ENST00000362210 119 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 Y_RNA.106-201ENST00000363189 100 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 SNORA16A-201ENST00000384342 137 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 RNU6-713P-201ENST00000384761 107 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 MIR1252-201ENST00000408861 65 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.11□□□□□ -1.59
PDGFAP04085 AC108032.1-201ENST00000416706 207 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFAP04085 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.11□□□□□ -1.59
PDGFAP04085 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFAP04085 AL772161.1-201ENST00000439130 476 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 RPS23P2-201ENST00000463671 415 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFAP04085 SUMO2P6-201ENST00000505273 288 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 SNORA40.14-201ENST00000516543 86 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 RNU6-1315P-201ENST00000517187 99 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC012400.1-201ENST00000518452 381 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC021006.3-201ENST00000530771 192 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.11□□□□□ -1.59
PDGFAP04085 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFAP04085 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFAP04085 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFAP04085 MIR4646-201ENST00000580775 63 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 MIR3936-201ENST00000584304 110 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.11□□□□□ -1.59
PDGFAP04085 AC002545.1-201ENST00000592511 181 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 AC011626.1-201ENST00000604710 562 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 MIR4272-201ENST00000635924 64 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDGFAP04085 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFAP04085 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.11□□□□□ -1.59
PDGFAP04085 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDGFAP04085 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDGFAP04085 AC008669.1-201ENST00000565823 2178 ntBASIC5.11□□□□□ -1.59
PDGFAP04085 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 AC009962.1-201ENST00000567327 3813 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFAP04085 RNU6-874P-201ENST00000362390 105 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 Y_RNA.210-201ENST00000364161 110 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 Y_RNA.307-201ENST00000365022 117 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 RNU1-43P-201ENST00000365052 165 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
PDGFAP04085 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDGFAP04085 AL138885.1-201ENST00000405921 675 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFAP04085 AL353997.1-201ENST00000432936 108 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 RANP8-201ENST00000444720 713 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 AC022447.4-201ENST00000504053 364 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDGFAP04085 TOMM22P4-201ENST00000511318 336 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.1□□□□□ -1.59
PDGFAP04085 RNU7-4P-201ENST00000516961 62 ntBASIC5.1□□□□□ -1.59
PDGFAP04085 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.1□□□□□ -1.59
PDGFAP04085 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.1□□□□□ -1.59
PDGFAP04085 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms