Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL359704.1-201ENST00000411586 781 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC109780.2-201ENST00000413467 845 ntBASIC3.91□□□□□ -1.78
MBD4O95243 MTND5P25-201ENST00000430499 799 ntBASIC3.91□□□□□ -1.78
MBD4O95243 RPL35AP22-201ENST00000436855 335 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD4O95243 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD4O95243 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD4O95243 OR6C5P-201ENST00000452388 923 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD4O95243 ATG12P2-201ENST00000456830 416 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AP1S2P1-201ENST00000457344 379 ntBASIC3.91□□□□□ -1.78
MBD4O95243 RPL23AP14-201ENST00000468281 468 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC021205.2-201ENST00000480069 347 ntBASIC3.91□□□□□ -1.78
MBD4O95243 MTCYBP35-201ENST00000503630 1137 ntBASIC3.91□□□□□ -1.78
MBD4O95243 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MBD4O95243 AC110794.1-201ENST00000505816 425 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD4O95243 SNORA31.22-201ENST00000517204 135 ntBASIC3.91□□□□□ -1.78
MBD4O95243 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD4O95243 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD4O95243 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD4O95243 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD4O95243 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.91□□□□□ -1.78
MBD4O95243 AP001004.1-201ENST00000582468 324 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.91□□□□□ -1.78
MBD4O95243 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MBD4O95243 AP000254.1-201ENST00000609934 520 ntBASIC3.91□□□□□ -1.78
MBD4O95243 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
MBD4O95243 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD4O95243 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD4O95243 DDX10P1-201ENST00000448545 1933 ntBASIC3.91□□□□□ -1.78
MBD4O95243 AC007256.1-201ENST00000392253 2765 ntBASIC3.91□□□□□ -1.78
MBD4O95243 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
MBD4O95243 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MBD4O95243 AC138915.3-201ENST00000562908 1389 ntBASIC3.9□□□□□ -1.78
MBD4O95243 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
MBD4O95243 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD4O95243 SNORA38.1-201ENST00000364172 131 ntBASIC3.9□□□□□ -1.79
MBD4O95243 MIR491-201ENST00000384877 84 ntBASIC3.9□□□□□ -1.79
MBD4O95243 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD4O95243 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.9□□□□□ -1.79
MBD4O95243 HMGB3P23-201ENST00000414981 585 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD4O95243 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD4O95243 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD4O95243 MTCYBP39-201ENST00000437562 491 ntBASIC3.9□□□□□ -1.79
MBD4O95243 TXNP1-201ENST00000441872 371 ntBASIC3.9□□□□□ -1.79
MBD4O95243 FAM103A2P-201ENST00000444122 354 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC115115.1-201ENST00000449927 248 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD4O95243 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.9□□□□□ -1.79
MBD4O95243 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD4O95243 HSPE1P6-201ENST00000479457 291 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC012181.1-201ENST00000479895 423 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.9□□□□□ -1.79
MBD4O95243 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD4O95243 RN7SKP57-201ENST00000517248 293 ntBASIC3.9□□□□□ -1.79
MBD4O95243 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.9□□□□□ -1.79
MBD4O95243 AC060771.1-201ENST00000582031 164 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AL357094.1-201ENST00000603845 844 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC009570.1-201ENST00000609599 745 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AL157817.1-201ENST00000614264 790 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC068831.7-201ENST00000616954 363 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AC079416.3-201ENST00000624479 549 ntBASIC3.9□□□□□ -1.79
MBD4O95243 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD4O95243 AC007671.2-201ENST00000637344 619 ntBASIC3.9□□□□□ -1.79
MBD4O95243 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD4O95243 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD4O95243 RIOK3P1-201ENST00000418778 1528 ntBASIC3.9□□□□□ -1.79
MBD4O95243 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD4O95243 MTND4P16-201ENST00000466108 1367 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
MBD4O95243 AP002088.1-201ENST00000382740 395 ntBASIC3.89□□□□□ -1.79
MBD4O95243 RNU6-769P-201ENST00000384407 104 ntBASIC3.89□□□□□ -1.79
MBD4O95243 RNU6-754P-201ENST00000391166 107 ntBASIC3.89□□□□□ -1.79
MBD4O95243 FAT1P1-201ENST00000406588 507 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 AC233728.2-201ENST00000425348 757 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL593851.1-201ENST00000426171 157 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL445669.1-201ENST00000426743 755 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD4O95243 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD4O95243 AC004801.2-202ENST00000463559 283 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL049714.1-201ENST00000466686 347 ntBASIC3.89□□□□□ -1.79
MBD4O95243 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD4O95243 AC026427.2-201ENST00000506228 536 ntBASIC3.89□□□□□ -1.79
MBD4O95243 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 NDUFB9P3-201ENST00000521269 501 ntBASIC3.89□□□□□ -1.79
MBD4O95243 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
MBD4O95243 AC007954.1-201ENST00000554198 494 ntBASIC3.89□□□□□ -1.79
MBD4O95243 AL845331.3-202ENST00000562856 261 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms