Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.63□□□□□ -1.51
GFRA3O60609 EDDM3DP-201ENST00000554692 434 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 MIR5095-201ENST00000578844 88 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA3O60609 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA3O60609 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GFRA3O60609 AL773545.4-201ENST00000637262 310 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 AL513478.4-201ENST00000641636 310 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
GFRA3O60609 AL731532.2-201ENST00000623542 1953 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA3O60609 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA3O60609 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 PABPC1P8-201ENST00000452851 2086 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 AC116667.1-201ENST00000604855 2072 ntBASIC5.63□□□□□ -1.51
GFRA3O60609 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA3O60609 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GFRA3O60609 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.63□□□□□ -1.51
GFRA3O60609 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.63□□□□□ -1.51
GFRA3O60609 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA3O60609 AC022031.1-201ENST00000585985 2593 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA3O60609 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GFRA3O60609 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA3O60609 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA3O60609 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
GFRA3O60609 AC007685.1-201ENST00000329806 452 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AL159987.1-201ENST00000347911 293 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 SNORD114-19-201ENST00000363072 75 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 RNU6-1175P-201ENST00000365200 107 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 RNU6-541P-201ENST00000384709 110 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.62□□□□□ -1.51
GFRA3O60609 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.62□□□□□ -1.51
GFRA3O60609 RNU6-516P-201ENST00000411381 104 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 RPS23P10-201ENST00000416185 486 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 RPL7AP25-201ENST00000423357 805 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AC099677.3-201ENST00000427081 395 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 EZH2P1-201ENST00000431167 291 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 MRPL48P1-201ENST00000445390 636 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AL590399.6-201ENST00000446396 307 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AL360271.2-201ENST00000447710 161 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AC023818.1-201ENST00000498379 384 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 AC093767.1-201ENST00000504523 156 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 RNU6-191P-201ENST00000516295 94 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.62□□□□□ -1.51
GFRA3O60609 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.62□□□□□ -1.51
GFRA3O60609 AC006001.4-201ENST00000622243 395 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA3O60609 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GFRA3O60609 IMMTP1-201ENST00000435590 2219 ntBASIC5.62□□□□□ -1.51
GFRA3O60609 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.62□□□□□ -1.51
GFRA3O60609 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.61□□□□□ -1.51
GFRA3O60609 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 RNU6-222P-201ENST00000362438 107 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 RNU6-228P-201ENST00000362700 106 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 RNA5SP197-201ENST00000363357 119 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 U3.6-201ENST00000363622 211 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 RNU6-915P-201ENST00000364943 103 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 Y_RNA.324-201ENST00000365165 102 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
GFRA3O60609 RNU6-20P-201ENST00000384106 107 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 MIR548A3-201ENST00000385297 97 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 RNU6-788P-201ENST00000390967 104 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 RNA5SP339-201ENST00000390987 122 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA3O60609 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GFRA3O60609 RPS15AP5-201ENST00000436276 388 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.61□□□□□ -1.51
GFRA3O60609 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
GFRA3O60609 INTS6P1-201ENST00000504674 2530 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 HMGB3P16-201ENST00000508037 287 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.61□□□□□ -1.51
GFRA3O60609 MIR5692A1-201ENST00000580523 69 ntBASIC5.61□□□□□ -1.51
GFRA3O60609 MIR4270-201ENST00000581799 70 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms