Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AL513302.2-201ENST00000562313 1842 ntBASIC4.3□□□□□ -1.72
KCNQ3O43525 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL356489.2-201ENST00000566968 3528 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
KCNQ3O43525 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
KCNQ3O43525 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 RNU6-989P-201ENST00000362756 107 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 SNORA75-201ENST00000384158 137 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KCNQ3O43525 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNQ3O43525 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AC112653.1-201ENST00000443851 386 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 snoU109.4-201ENST00000458953 143 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 SNORD42A-201ENST00000459584 64 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AP001486.1-201ENST00000463339 476 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 LARP1BP2-201ENST00000486594 519 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KCNQ3O43525 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KCNQ3O43525 NDUFB4P2-201ENST00000509515 391 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 CDC42P4-201ENST00000510507 563 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 RNU6-1003P-201ENST00000517099 105 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 RNU4-60P-201ENST00000517239 135 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL391156.1-201ENST00000554965 554 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNQ3O43525 MIR4738-201ENST00000579134 87 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 MTND1P15-201ENST00000579262 949 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 AC078795.2-201ENST00000602835 1252 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AC025946.2-201ENST00000603398 234 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AC006566.1-201ENST00000608943 513 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNQ3O43525 AC008498.1-201ENST00000613012 531 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 AC015540.1-201ENST00000615828 501 ntBASIC4.29□□□□□ -1.72
KCNQ3O43525 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNQ3O43525 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNQ3O43525 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNQ3O43525 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNQ3O43525 Y_RNA.608-201ENST00000410647 95 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC127526.1-201ENST00000417526 366 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC006548.1-201ENST00000427470 102 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC108734.1-201ENST00000439549 399 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNQ3O43525 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNQ3O43525 AL353691.1-201ENST00000451332 387 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNQ3O43525 AC021382.1-201ENST00000483523 359 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC012170.1-201ENST00000495139 359 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNQ3O43525 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNQ3O43525 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNQ3O43525 RNU6-405P-201ENST00000516637 110 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNQ3O43525 AC006557.5-201ENST00000603126 811 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC011451.2-201ENST00000604303 598 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AL031176.1-201ENST00000604554 466 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.28□□□□□ -1.72
KCNQ3O43525 AC018755.4-201ENST00000619715 454 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC006065.5-201ENST00000623427 349 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 CR381572.1-201ENST00000625098 102 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
KCNQ3O43525 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
KCNQ3O43525 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNQ3O43525 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNQ3O43525 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNQ3O43525 TNPO1P3-201ENST00000436471 2662 ntBASIC4.28□□□□□ -1.73
KCNQ3O43525 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNQ3O43525 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNQ3O43525 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNQ3O43525 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNQ3O43525 FRG1BP-201ENST00000278882 761 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 RNU6-359P-201ENST00000365466 108 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 U3.20-201ENST00000390909 217 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNQ3O43525 HMGB3P23-201ENST00000414981 585 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 SPA17P1-201ENST00000416656 452 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNQ3O43525 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNQ3O43525 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNQ3O43525 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNQ3O43525 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNQ3O43525 RPS4XP2-201ENST00000458402 793 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNQ3O43525 AC006445.1-201ENST00000491925 405 ntBASIC4.27□□□□□ -1.73
KCNQ3O43525 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms