Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AC006270.3-201ENST00000605967 1036 ntBASIC3.08□□□□□ -1.92
LRRTM2O43300 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRTM2O43300 AC024560.3-201ENST00000608482 349 ntBASIC3.08□□□□□ -1.92
LRRTM2O43300 AC097655.1-201ENST00000635075 318 ntBASIC3.08□□□□□ -1.92
LRRTM2O43300 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRTM2O43300 DDX43P2-201ENST00000604753 1354 ntBASIC3.08□□□□□ -1.92
LRRTM2O43300 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRTM2O43300 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRTM2O43300 MFSD8-233ENST00000641482 4860 ntBASIC3.08□□□□□ -1.92
LRRTM2O43300 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LRRTM2O43300 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRTM2O43300 RNU6-433P-201ENST00000363216 104 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 RNU6-173P-201ENST00000364215 104 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 SNORA4.1-201ENST00000364263 144 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 RNU6-7-201ENST00000364784 107 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 RNU6-8-201ENST00000365467 107 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 CD24P4-201ENST00000382840 243 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 SNORA1.3-201ENST00000384676 136 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 RPL5P18-201ENST00000406671 891 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AL353678.1-201ENST00000422735 741 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC011233.1-201ENST00000422812 283 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AL593851.1-201ENST00000426171 157 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 UBE2D3P1-201ENST00000436669 444 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 ISCA1P2-201ENST00000438679 421 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AL590664.1-201ENST00000448065 339 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AL109741.2-201ENST00000455561 343 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC011825.1-201ENST00000484967 388 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC096576.1-201ENST00000489014 359 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC090453.1-201ENST00000495560 436 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC114967.1-201ENST00000504890 259 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC110794.1-201ENST00000505816 425 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.07□□□□□ -1.92
LRRTM2O43300 SNORA3.4-201ENST00000515969 96 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 RNU6-27P-201ENST00000516146 107 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AP003461.1-201ENST00000528866 78 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LRRTM2O43300 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.07□□□□□ -1.92
LRRTM2O43300 CKS1BP3-201ENST00000600888 237 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC021171.1-201ENST00000603137 706 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 RPL23AP92-201ENST00000603609 255 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC018638.7-201ENST00000605836 1114 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC072039.2-201ENST00000608883 439 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC131159.1-201ENST00000621854 213 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AL353748.2-201ENST00000622148 471 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC073476.4-201ENST00000628409 72 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 OR5BR1P-201ENST00000524992 1330 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRTM2O43300 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LRRTM2O43300 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRRTM2O43300 AC011460.1-201ENST00000636268 1834 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC017071.1-201ENST00000564407 2204 ntBASIC3.07□□□□□ -1.92
LRRTM2O43300 AC004944.1-201ENST00000517807 3059 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
LRRTM2O43300 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LRRTM2O43300 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRRTM2O43300 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LRRTM2O43300 SNORD56.3-201ENST00000363507 71 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 AF228730.1-201ENST00000397972 663 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 TPMTP2-201ENST00000414372 726 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 AL356968.1-201ENST00000416622 474 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRTM2O43300 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRTM2O43300 AC098592.1-201ENST00000419352 333 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRTM2O43300 CETN4P-201ENST00000432407 469 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 FTH1P1-201ENST00000437933 532 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 MTND5P2-201ENST00000442927 1142 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 Z75741.1-201ENST00000446793 314 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 ART2BP-201ENST00000453501 499 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.06□□□□□ -1.92
LRRTM2O43300 AC112198.1-201ENST00000505369 1220 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 AC006390.1-201ENST00000508068 283 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 CBX3P3-201ENST00000508108 532 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.06□□□□□ -1.92
LRRTM2O43300 LTV1P1-201ENST00000510683 1237 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.06□□□□□ -1.92
LRRTM2O43300 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
LRRTM2O43300 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
LRRTM2O43300 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms