Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 CYCSP40-201ENST00000575927 294 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 MIR3149-201ENST00000584629 83 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AC007938.3-201ENST00000604965 623 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AL031666.3-201ENST00000609320 1006 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AL390240.1-201ENST00000612950 384 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AC133104.2-201ENST00000615272 193 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AC007792.1-201ENST00000623023 402 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 AC093775.1-201ENST00000624154 1868 ntBASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC2Q9Y5Z7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 MIR372-201ENST00000362225 67 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 Y_RNA.378-201ENST00000365652 113 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 UBBP2-201ENST00000376781 231 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-641P-201ENST00000384006 107 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 Y_RNA.482-201ENST00000384377 111 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 EIF4HP2-201ENST00000424380 563 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 RN7SL809P-201ENST00000482040 297 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC079140.5-201ENST00000507882 310 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 RNA5SP454-201ENST00000517231 127 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC090136.1-201ENST00000520009 240 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 HMGB1P41-201ENST00000520234 440 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC109635.4-202ENST00000531666 412 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 MIR8059-201ENST00000620427 81 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC011155.2-201ENST00000623202 216 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 AC140479.6-201ENST00000633535 357 ntBASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC2Q9Y5Z7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AL158163.1-201ENST00000603915 1649 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-179P-201ENST00000363350 107 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RNA5SP283-201ENST00000365604 119 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-574P-201ENST00000384265 107 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-985P-201ENST00000410182 104 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 VDAC1P9-201ENST00000412766 841 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RPL7P10-201ENST00000417407 739 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC105402.2-201ENST00000438503 358 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 TXNP1-201ENST00000441872 371 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 BTF3P6-201ENST00000448054 499 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AL353691.1-201ENST00000451332 387 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RPL30P11-201ENST00000495304 339 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AP003122.3-201ENST00000526316 255 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AP000889.1-201ENST00000530968 660 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 MIR4790-201ENST00000577799 79 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC023043.2-201ENST00000589678 1026 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 Z82243.1-201ENST00000609432 473 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms