Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RNA5SP315-201ENST00000516340 116 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RN7SKP244-201ENST00000516513 307 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RNA5SP312-201ENST00000517068 116 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC008011.1-201ENST00000545989 227 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL157394.1-201ENST00000562983 1224 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 TPMTP1-201ENST00000592307 737 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC011468.4-201ENST00000603942 409 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL365503.1-201ENST00000605247 905 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC090517.2-201ENST00000614966 680 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC008250.2-201ENST00000615261 205 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC091925.2-201ENST00000625059 256 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL732372.2-225ENST00000642124 456 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC116096.1-201ENST00000566804 2314 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF734P-201ENST00000419494 1534 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 OR4G2P-201ENST00000328113 903 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-853P-201ENST00000364306 107 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-1283P-201ENST00000365314 105 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RNA5SP235-201ENST00000365411 114 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-1042P-201ENST00000384204 107 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RNU1-13P-201ENST00000384499 162 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MIR548F1-201ENST00000408667 84 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 ARF4P2-201ENST00000430209 526 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MRPS18BP2-201ENST00000434310 759 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 SETP5-201ENST00000437270 562 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL049734.2-201ENST00000441066 616 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MTND1P1-201ENST00000445453 368 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC079448.1-201ENST00000449377 373 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RPL21P104-201ENST00000464143 478 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RPL23AP14-201ENST00000468281 468 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RN7SL132P-201ENST00000478131 296 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL049830.2-201ENST00000480072 201 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC034222.1-201ENST00000494052 532 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RPL23AP55-201ENST00000498163 452 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC114967.1-201ENST00000504890 259 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC026784.1-201ENST00000507986 352 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-27P-201ENST00000516146 107 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC024224.1-201ENST00000538284 609 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 CCNG2P1-201ENST00000549521 1000 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC087481.2-201ENST00000565492 330 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 MIR4286-201ENST00000580651 93 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 CKS1BP3-201ENST00000600888 237 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC009159.1-201ENST00000618386 642 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AL160394.1-201ENST00000624765 724 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 AC068724.3-201ENST00000625906 87 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 OR5AK4P-201ENST00000635912 903 ntBASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.16□□□□□ -1.9
MRPS28Q9Y2Q9 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms